Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cxcr3O88410 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.36■■□□□ 1.33
Cxcr3O88410 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cxcr3O88410 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cxcr3O88410 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Cxcr3O88410 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cxcr3O88410 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cxcr3O88410 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cxcr3O88410 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cxcr3O88410 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cxcr3O88410 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cxcr3O88410 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cxcr3O88410 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cxcr3O88410 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.32■■□□□ 1.32
Cxcr3O88410 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cxcr3O88410 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cxcr3O88410 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cxcr3O88410 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cxcr3O88410 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.28■■□□□ 1.32
Cxcr3O88410 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cxcr3O88410 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cxcr3O88410 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cxcr3O88410 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cxcr3O88410 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Cxcr3O88410 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Cxcr3O88410 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cxcr3O88410 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cxcr3O88410 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.24■■□□□ 1.31
Cxcr3O88410 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cxcr3O88410 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cxcr3O88410 Mir6538-201ENSMUST00000183713 110 ntBASIC23.23■■□□□ 1.31
Cxcr3O88410 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.23■■□□□ 1.31
Cxcr3O88410 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cxcr3O88410 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cxcr3O88410 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cxcr3O88410 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cxcr3O88410 Gm11175-201ENSMUST00000116172 543 ntBASIC23.22■■□□□ 1.31
Cxcr3O88410 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.22■■□□□ 1.31
Cxcr3O88410 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Cxcr3O88410 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cxcr3O88410 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cxcr3O88410 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cxcr3O88410 Gm4799-201ENSMUST00000095396 657 ntBASIC23.21■■□□□ 1.31
Cxcr3O88410 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Cxcr3O88410 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cxcr3O88410 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cxcr3O88410 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.19■■□□□ 1.3
Cxcr3O88410 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cxcr3O88410 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.19■■□□□ 1.3
Cxcr3O88410 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cxcr3O88410 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cxcr3O88410 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Cxcr3O88410 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cxcr3O88410 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cxcr3O88410 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Cxcr3O88410 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cxcr3O88410 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.17■■□□□ 1.3
Cxcr3O88410 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.16■■□□□ 1.3
Cxcr3O88410 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cxcr3O88410 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cxcr3O88410 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Cxcr3O88410 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Cxcr3O88410 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
Cxcr3O88410 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cxcr3O88410 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Cxcr3O88410 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cxcr3O88410 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cxcr3O88410 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cxcr3O88410 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Cxcr3O88410 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cxcr3O88410 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.13■■□□□ 1.29
Cxcr3O88410 Gm6311-201ENSMUST00000073790 878 ntBASIC23.13■■□□□ 1.29
Cxcr3O88410 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cxcr3O88410 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cxcr3O88410 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cxcr3O88410 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cxcr3O88410 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cxcr3O88410 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cxcr3O88410 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cxcr3O88410 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cxcr3O88410 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cxcr3O88410 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Cxcr3O88410 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cxcr3O88410 Mir3960-201ENSMUST00000198213 73 ntBASIC23.09■■□□□ 1.29
Cxcr3O88410 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.09■■□□□ 1.29
Cxcr3O88410 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cxcr3O88410 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.09■■□□□ 1.29
Cxcr3O88410 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Cxcr3O88410 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Cxcr3O88410 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Cxcr3O88410 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cxcr3O88410 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.07■■□□□ 1.28
Cxcr3O88410 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cxcr3O88410 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cxcr3O88410 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cxcr3O88410 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.06■■□□□ 1.28
Cxcr3O88410 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.05■■□□□ 1.28
Cxcr3O88410 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.04■■□□□ 1.28
Cxcr3O88410 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.04■■□□□ 1.28
Cxcr3O88410 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms