Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10139O88245 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10139O88245 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.21□□□□□ -0.13
Gm10139O88245 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gm10139O88245 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10139O88245 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10139O88245 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10139O88245 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10139O88245 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10139O88245 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10139O88245 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10139O88245 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10139O88245 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10139O88245 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10139O88245 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10139O88245 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10139O88245 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10139O88245 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm10139O88245 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10139O88245 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10139O88245 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10139O88245 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10139O88245 Il17rd-202ENSMUST00000223942 2186 ntBASIC14.18□□□□□ -0.14
Gm10139O88245 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10139O88245 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10139O88245 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10139O88245 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gm10139O88245 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10139O88245 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10139O88245 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm10139O88245 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm10139O88245 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10139O88245 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10139O88245 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10139O88245 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10139O88245 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gm10139O88245 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm10139O88245 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm10139O88245 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm10139O88245 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm10139O88245 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm10139O88245 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm10139O88245 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Gm10139O88245 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm10139O88245 Gm14121-201ENSMUST00000121441 1380 ntBASIC14.14□□□□□ -0.15
Gm10139O88245 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Gm10139O88245 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Gm10139O88245 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm10139O88245 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm10139O88245 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm10139O88245 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm10139O88245 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm10139O88245 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm10139O88245 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm10139O88245 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gm10139O88245 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm10139O88245 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gm10139O88245 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm10139O88245 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm10139O88245 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm10139O88245 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm10139O88245 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm10139O88245 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm10139O88245 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm10139O88245 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm10139O88245 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm10139O88245 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gm10139O88245 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gm10139O88245 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm10139O88245 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm10139O88245 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Gm10139O88245 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gm10139O88245 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm10139O88245 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Gm10139O88245 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm10139O88245 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm10139O88245 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gm10139O88245 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gm10139O88245 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm10139O88245 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm10139O88245 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Gm10139O88245 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.08□□□□□ -0.16
Gm10139O88245 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm10139O88245 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm10139O88245 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gm10139O88245 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm10139O88245 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm10139O88245 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm10139O88245 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Gm10139O88245 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm10139O88245 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm10139O88245 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm10139O88245 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm10139O88245 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Gm10139O88245 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm10139O88245 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm10139O88245 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm10139O88245 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm10139O88245 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm10139O88245 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms