Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1bO70237 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Gfi1bO70237 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1bO70237 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1bO70237 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1bO70237 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1bO70237 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1bO70237 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gfi1bO70237 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gfi1bO70237 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gfi1bO70237 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Gfi1bO70237 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gfi1bO70237 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Gfi1bO70237 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.22■□□□□ 0.67
Gfi1bO70237 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1bO70237 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1bO70237 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1bO70237 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1bO70237 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1bO70237 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.21■□□□□ 0.67
Gfi1bO70237 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gfi1bO70237 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gfi1bO70237 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1bO70237 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.2■□□□□ 0.66
Gfi1bO70237 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1bO70237 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1bO70237 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.2■□□□□ 0.66
Gfi1bO70237 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gfi1bO70237 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gfi1bO70237 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gfi1bO70237 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gfi1bO70237 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfi1bO70237 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gfi1bO70237 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gfi1bO70237 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gfi1bO70237 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gfi1bO70237 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gfi1bO70237 Gm9397-201ENSMUST00000200125 605 ntBASIC19.18■□□□□ 0.66
Gfi1bO70237 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gfi1bO70237 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gfi1bO70237 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gfi1bO70237 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.17■□□□□ 0.66
Gfi1bO70237 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gfi1bO70237 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Gfi1bO70237 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Gfi1bO70237 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gfi1bO70237 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Gfi1bO70237 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gfi1bO70237 Gm45855-201ENSMUST00000212546 880 ntBASIC19.16■□□□□ 0.66
Gfi1bO70237 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gfi1bO70237 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Gfi1bO70237 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gfi1bO70237 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gfi1bO70237 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.15■□□□□ 0.66
Gfi1bO70237 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gfi1bO70237 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gfi1bO70237 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.15■□□□□ 0.66
Gfi1bO70237 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Gfi1bO70237 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gfi1bO70237 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gfi1bO70237 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gfi1bO70237 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gfi1bO70237 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gfi1bO70237 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Gfi1bO70237 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gfi1bO70237 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gfi1bO70237 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gfi1bO70237 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gfi1bO70237 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gfi1bO70237 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gfi1bO70237 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gfi1bO70237 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gfi1bO70237 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Gfi1bO70237 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gfi1bO70237 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gfi1bO70237 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.1■□□□□ 0.65
Gfi1bO70237 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gfi1bO70237 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Gfi1bO70237 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gfi1bO70237 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gfi1bO70237 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gfi1bO70237 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Gfi1bO70237 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gfi1bO70237 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gfi1bO70237 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gfi1bO70237 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Gfi1bO70237 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gfi1bO70237 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gfi1bO70237 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.08■□□□□ 0.65
Gfi1bO70237 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Gfi1bO70237 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gfi1bO70237 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Gfi1bO70237 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gfi1bO70237 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Gfi1bO70237 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gfi1bO70237 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gfi1bO70237 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Gfi1bO70237 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gfi1bO70237 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gfi1bO70237 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms