Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Alx3O70137 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Alx3O70137 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Alx3O70137 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Alx3O70137 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Alx3O70137 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Alx3O70137 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Alx3O70137 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Alx3O70137 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Alx3O70137 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Alx3O70137 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.98■□□□□ 0.95
Alx3O70137 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Alx3O70137 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Alx3O70137 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx3O70137 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Alx3O70137 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Alx3O70137 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.96■□□□□ 0.95
Alx3O70137 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.95
Alx3O70137 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Alx3O70137 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Alx3O70137 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Alx3O70137 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Alx3O70137 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx3O70137 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx3O70137 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx3O70137 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx3O70137 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx3O70137 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx3O70137 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx3O70137 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx3O70137 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Alx3O70137 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx3O70137 Particl-201ENSMUST00000205370 1560 ntBASIC20.92■□□□□ 0.94
Alx3O70137 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx3O70137 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx3O70137 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx3O70137 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Alx3O70137 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Alx3O70137 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx3O70137 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx3O70137 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx3O70137 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Alx3O70137 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx3O70137 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Alx3O70137 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx3O70137 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx3O70137 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Alx3O70137 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx3O70137 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.88■□□□□ 0.93
Alx3O70137 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Alx3O70137 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.88■□□□□ 0.93
Alx3O70137 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.88■□□□□ 0.93
Alx3O70137 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Alx3O70137 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Alx3O70137 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Alx3O70137 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Alx3O70137 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Alx3O70137 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Alx3O70137 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Alx3O70137 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Alx3O70137 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Alx3O70137 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Alx3O70137 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Alx3O70137 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.86■□□□□ 0.93
Alx3O70137 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.86■□□□□ 0.93
Alx3O70137 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.86■□□□□ 0.93
Alx3O70137 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Alx3O70137 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Alx3O70137 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Alx3O70137 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Alx3O70137 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Alx3O70137 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Alx3O70137 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Alx3O70137 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Alx3O70137 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Alx3O70137 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Alx3O70137 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Alx3O70137 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Alx3O70137 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Alx3O70137 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Alx3O70137 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alx3O70137 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.81■□□□□ 0.92
Alx3O70137 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Alx3O70137 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Alx3O70137 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Alx3O70137 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Alx3O70137 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Alx3O70137 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.79■□□□□ 0.92
Alx3O70137 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Alx3O70137 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Alx3O70137 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Alx3O70137 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Alx3O70137 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alx3O70137 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alx3O70137 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
Alx3O70137 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alx3O70137 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Alx3O70137 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Alx3O70137 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Alx3O70137 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms