Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndufa1O35683 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndufa1O35683 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ndufa1O35683 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndufa1O35683 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ndufa1O35683 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndufa1O35683 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ndufa1O35683 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ndufa1O35683 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndufa1O35683 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ndufa1O35683 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndufa1O35683 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndufa1O35683 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndufa1O35683 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndufa1O35683 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndufa1O35683 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ndufa1O35683 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ndufa1O35683 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndufa1O35683 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ndufa1O35683 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ndufa1O35683 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ndufa1O35683 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ndufa1O35683 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndufa1O35683 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ndufa1O35683 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.55■□□□□ 0.24
Ndufa1O35683 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.55■□□□□ 0.24
Ndufa1O35683 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndufa1O35683 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Ndufa1O35683 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.54■□□□□ 0.24
Ndufa1O35683 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ndufa1O35683 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndufa1O35683 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndufa1O35683 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ndufa1O35683 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndufa1O35683 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ndufa1O35683 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ndufa1O35683 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndufa1O35683 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ndufa1O35683 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndufa1O35683 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ndufa1O35683 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndufa1O35683 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndufa1O35683 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndufa1O35683 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndufa1O35683 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ndufa1O35683 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ndufa1O35683 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndufa1O35683 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndufa1O35683 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufa1O35683 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufa1O35683 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.49■□□□□ 0.23
Ndufa1O35683 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ndufa1O35683 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ndufa1O35683 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ndufa1O35683 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ndufa1O35683 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufa1O35683 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ndufa1O35683 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ndufa1O35683 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufa1O35683 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndufa1O35683 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufa1O35683 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Ndufa1O35683 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufa1O35683 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.47■□□□□ 0.23
Ndufa1O35683 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndufa1O35683 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ndufa1O35683 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndufa1O35683 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndufa1O35683 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndufa1O35683 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
Ndufa1O35683 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Ndufa1O35683 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ndufa1O35683 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndufa1O35683 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndufa1O35683 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ndufa1O35683 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndufa1O35683 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ndufa1O35683 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Ndufa1O35683 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.44■□□□□ 0.22
Ndufa1O35683 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufa1O35683 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufa1O35683 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufa1O35683 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ndufa1O35683 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufa1O35683 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Ndufa1O35683 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufa1O35683 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ndufa1O35683 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndufa1O35683 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufa1O35683 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Ndufa1O35683 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Ndufa1O35683 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufa1O35683 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.42■□□□□ 0.22
Ndufa1O35683 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Ndufa1O35683 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.42■□□□□ 0.22
Ndufa1O35683 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndufa1O35683 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ndufa1O35683 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.42■□□□□ 0.22
Ndufa1O35683 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ndufa1O35683 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 205.2 ms