Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb11O09111 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb11O09111 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufb11O09111 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.75■□□□□ 0.59
Ndufb11O09111 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ndufb11O09111 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufb11O09111 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.74■□□□□ 0.59
Ndufb11O09111 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufb11O09111 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufb11O09111 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufb11O09111 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufb11O09111 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufb11O09111 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufb11O09111 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufb11O09111 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ndufb11O09111 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufb11O09111 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndufb11O09111 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndufb11O09111 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ndufb11O09111 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndufb11O09111 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndufb11O09111 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ndufb11O09111 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndufb11O09111 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.72■□□□□ 0.59
Ndufb11O09111 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndufb11O09111 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ndufb11O09111 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Ndufb11O09111 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ndufb11O09111 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.71■□□□□ 0.59
Ndufb11O09111 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndufb11O09111 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndufb11O09111 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndufb11O09111 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndufb11O09111 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndufb11O09111 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndufb11O09111 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndufb11O09111 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndufb11O09111 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndufb11O09111 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.67■□□□□ 0.58
Ndufb11O09111 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndufb11O09111 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufb11O09111 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufb11O09111 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufb11O09111 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufb11O09111 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndufb11O09111 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndufb11O09111 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndufb11O09111 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ndufb11O09111 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndufb11O09111 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndufb11O09111 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndufb11O09111 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ndufb11O09111 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ndufb11O09111 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ndufb11O09111 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ndufb11O09111 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndufb11O09111 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndufb11O09111 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ndufb11O09111 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ndufb11O09111 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ndufb11O09111 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ndufb11O09111 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ndufb11O09111 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ndufb11O09111 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndufb11O09111 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.61■□□□□ 0.57
Ndufb11O09111 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ndufb11O09111 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndufb11O09111 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.61■□□□□ 0.57
Ndufb11O09111 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ndufb11O09111 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufb11O09111 Notumos-201ENSMUST00000151998 2659 ntBASIC18.6■□□□□ 0.57
Ndufb11O09111 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufb11O09111 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufb11O09111 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufb11O09111 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufb11O09111 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufb11O09111 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufb11O09111 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ndufb11O09111 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ndufb11O09111 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ndufb11O09111 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ndufb11O09111 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ndufb11O09111 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ndufb11O09111 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ndufb11O09111 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.59■□□□□ 0.57
Ndufb11O09111 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Ndufb11O09111 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ndufb11O09111 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ndufb11O09111 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ndufb11O09111 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ndufb11O09111 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ndufb11O09111 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndufb11O09111 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndufb11O09111 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndufb11O09111 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ndufb11O09111 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ndufb11O09111 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ndufb11O09111 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndufb11O09111 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndufb11O09111 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms