Protein–RNA interactions for Protein: A3KGB4

Tbc1d8b, TBC1 domain family member 8B, mousemouse

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbc1d8bA3KGB4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Tbc1d8bA3KGB4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
Tbc1d8bA3KGB4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Tbc1d8bA3KGB4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Tbc1d8bA3KGB4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Tbc1d8bA3KGB4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Tbc1d8bA3KGB4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.54■■■□□ 2
Tbc1d8bA3KGB4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
Tbc1d8bA3KGB4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Tbc1d8bA3KGB4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Tbc1d8bA3KGB4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.53■■■□□ 2
Tbc1d8bA3KGB4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.53■■■□□ 2
Tbc1d8bA3KGB4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Tbc1d8bA3KGB4 Gm11687-201ENSMUST00000118911 886 ntBASIC27.52■■■□□ 2
Tbc1d8bA3KGB4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.52■■■□□ 2
Tbc1d8bA3KGB4 Gm16437-201ENSMUST00000025669 507 ntBASIC27.52■■■□□ 2
Tbc1d8bA3KGB4 Gm4799-201ENSMUST00000095396 657 ntBASIC27.52■■■□□ 2
Tbc1d8bA3KGB4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Tbc1d8bA3KGB4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.51■■■□□ 2
Tbc1d8bA3KGB4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Tbc1d8bA3KGB4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Tbc1d8bA3KGB4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.51■■□□□ 1.99
Tbc1d8bA3KGB4 Gm9806-201ENSMUST00000051080 552 ntBASIC27.51■■□□□ 1.99
Tbc1d8bA3KGB4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
Tbc1d8bA3KGB4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Tbc1d8bA3KGB4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Tbc1d8bA3KGB4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
Tbc1d8bA3KGB4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Tbc1d8bA3KGB4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.49■■□□□ 1.99
Tbc1d8bA3KGB4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Tbc1d8bA3KGB4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Tbc1d8bA3KGB4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Tbc1d8bA3KGB4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.48■■□□□ 1.99
Tbc1d8bA3KGB4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
Tbc1d8bA3KGB4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Tbc1d8bA3KGB4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
Tbc1d8bA3KGB4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Tbc1d8bA3KGB4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Tbc1d8bA3KGB4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.43■■□□□ 1.98
Tbc1d8bA3KGB4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Tbc1d8bA3KGB4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Tbc1d8bA3KGB4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Tbc1d8bA3KGB4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Tbc1d8bA3KGB4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Tbc1d8bA3KGB4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Tbc1d8bA3KGB4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Tbc1d8bA3KGB4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Tbc1d8bA3KGB4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Tbc1d8bA3KGB4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Tbc1d8bA3KGB4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Tbc1d8bA3KGB4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.38■■□□□ 1.97
Tbc1d8bA3KGB4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.38■■□□□ 1.97
Tbc1d8bA3KGB4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.38■■□□□ 1.97
Tbc1d8bA3KGB4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Tbc1d8bA3KGB4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.37■■□□□ 1.97
Tbc1d8bA3KGB4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Tbc1d8bA3KGB4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Tbc1d8bA3KGB4 Gm27502-201ENSMUST00000183495 199 ntBASIC27.36■■□□□ 1.97
Tbc1d8bA3KGB4 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.36■■□□□ 1.97
Tbc1d8bA3KGB4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Tbc1d8bA3KGB4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.35■■□□□ 1.97
Tbc1d8bA3KGB4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Tbc1d8bA3KGB4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Tbc1d8bA3KGB4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Tbc1d8bA3KGB4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.34■■□□□ 1.97
Tbc1d8bA3KGB4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Tbc1d8bA3KGB4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.34■■□□□ 1.97
Tbc1d8bA3KGB4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
Tbc1d8bA3KGB4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
Tbc1d8bA3KGB4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
Tbc1d8bA3KGB4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Tbc1d8bA3KGB4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Tbc1d8bA3KGB4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
Tbc1d8bA3KGB4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.3■■□□□ 1.96
Tbc1d8bA3KGB4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Tbc1d8bA3KGB4 Gm7332-201ENSMUST00000118351 454 ntBASIC27.29■■□□□ 1.96
Tbc1d8bA3KGB4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Tbc1d8bA3KGB4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Tbc1d8bA3KGB4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.28■■□□□ 1.96
Tbc1d8bA3KGB4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Tbc1d8bA3KGB4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Tbc1d8bA3KGB4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Tbc1d8bA3KGB4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Tbc1d8bA3KGB4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Tbc1d8bA3KGB4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Tbc1d8bA3KGB4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.25■■□□□ 1.95
Tbc1d8bA3KGB4 Mir3960-201ENSMUST00000198213 73 ntBASIC27.25■■□□□ 1.95
Tbc1d8bA3KGB4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Tbc1d8bA3KGB4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Tbc1d8bA3KGB4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Tbc1d8bA3KGB4 Gm45364-201ENSMUST00000210883 159 ntBASIC27.24■■□□□ 1.95
Tbc1d8bA3KGB4 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.24■■□□□ 1.95
Tbc1d8bA3KGB4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Tbc1d8bA3KGB4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.23■■□□□ 1.95
Tbc1d8bA3KGB4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Tbc1d8bA3KGB4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Tbc1d8bA3KGB4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Tbc1d8bA3KGB4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Tbc1d8bA3KGB4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Tbc1d8bA3KGB4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms