Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav19A0A0B4J1K4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav19A0A0B4J1K4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trav19A0A0B4J1K4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav19A0A0B4J1K4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav19A0A0B4J1K4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav19A0A0B4J1K4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav19A0A0B4J1K4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav19A0A0B4J1K4 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.31■□□□□ 0.36
Trav19A0A0B4J1K4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav19A0A0B4J1K4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav19A0A0B4J1K4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav19A0A0B4J1K4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav19A0A0B4J1K4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav19A0A0B4J1K4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav19A0A0B4J1K4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav19A0A0B4J1K4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav19A0A0B4J1K4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.29■□□□□ 0.36
Trav19A0A0B4J1K4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav19A0A0B4J1K4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav19A0A0B4J1K4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav19A0A0B4J1K4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav19A0A0B4J1K4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav19A0A0B4J1K4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav19A0A0B4J1K4 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.28■□□□□ 0.36
Trav19A0A0B4J1K4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav19A0A0B4J1K4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav19A0A0B4J1K4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav19A0A0B4J1K4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav19A0A0B4J1K4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav19A0A0B4J1K4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav19A0A0B4J1K4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav19A0A0B4J1K4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav19A0A0B4J1K4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav19A0A0B4J1K4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav19A0A0B4J1K4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav19A0A0B4J1K4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trav19A0A0B4J1K4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav19A0A0B4J1K4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav19A0A0B4J1K4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav19A0A0B4J1K4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav19A0A0B4J1K4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav19A0A0B4J1K4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav19A0A0B4J1K4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.24■□□□□ 0.35
Trav19A0A0B4J1K4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav19A0A0B4J1K4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav19A0A0B4J1K4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav19A0A0B4J1K4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav19A0A0B4J1K4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav19A0A0B4J1K4 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.23■□□□□ 0.35
Trav19A0A0B4J1K4 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.23■□□□□ 0.35
Trav19A0A0B4J1K4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav19A0A0B4J1K4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav19A0A0B4J1K4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav19A0A0B4J1K4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav19A0A0B4J1K4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav19A0A0B4J1K4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav19A0A0B4J1K4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav19A0A0B4J1K4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav19A0A0B4J1K4 Particl-201ENSMUST00000205370 1560 ntBASIC17.21■□□□□ 0.35
Trav19A0A0B4J1K4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav19A0A0B4J1K4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav19A0A0B4J1K4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav19A0A0B4J1K4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav19A0A0B4J1K4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav19A0A0B4J1K4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav19A0A0B4J1K4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav19A0A0B4J1K4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.18■□□□□ 0.34
Trav19A0A0B4J1K4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav19A0A0B4J1K4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trav19A0A0B4J1K4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav19A0A0B4J1K4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Trav19A0A0B4J1K4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav19A0A0B4J1K4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trav19A0A0B4J1K4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav19A0A0B4J1K4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav19A0A0B4J1K4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav19A0A0B4J1K4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav19A0A0B4J1K4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav19A0A0B4J1K4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav19A0A0B4J1K4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav19A0A0B4J1K4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav19A0A0B4J1K4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav19A0A0B4J1K4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav19A0A0B4J1K4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav19A0A0B4J1K4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav19A0A0B4J1K4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav19A0A0B4J1K4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav19A0A0B4J1K4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav19A0A0B4J1K4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav19A0A0B4J1K4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav19A0A0B4J1K4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav19A0A0B4J1K4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.13■□□□□ 0.33
Trav19A0A0B4J1K4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav19A0A0B4J1K4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav19A0A0B4J1K4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav19A0A0B4J1K4 Zfp131-205ENSMUST00000223812 663 ntBASIC17.12■□□□□ 0.33
Trav19A0A0B4J1K4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trav19A0A0B4J1K4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav19A0A0B4J1K4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms