Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19■□□□□ 0.63
Trav18A0A075B656 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Trav18A0A075B656 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trav18A0A075B656 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav18A0A075B656 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav18A0A075B656 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav18A0A075B656 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav18A0A075B656 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav18A0A075B656 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav18A0A075B656 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.98■□□□□ 0.63
Trav18A0A075B656 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav18A0A075B656 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav18A0A075B656 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav18A0A075B656 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trav18A0A075B656 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav18A0A075B656 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav18A0A075B656 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav18A0A075B656 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav18A0A075B656 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav18A0A075B656 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav18A0A075B656 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav18A0A075B656 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav18A0A075B656 Particl-201ENSMUST00000205370 1560 ntBASIC18.95■□□□□ 0.62
Trav18A0A075B656 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav18A0A075B656 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav18A0A075B656 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav18A0A075B656 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav18A0A075B656 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav18A0A075B656 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav18A0A075B656 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav18A0A075B656 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav18A0A075B656 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Trav18A0A075B656 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav18A0A075B656 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav18A0A075B656 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav18A0A075B656 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav18A0A075B656 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav18A0A075B656 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav18A0A075B656 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav18A0A075B656 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav18A0A075B656 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav18A0A075B656 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav18A0A075B656 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav18A0A075B656 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav18A0A075B656 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav18A0A075B656 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav18A0A075B656 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav18A0A075B656 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trav18A0A075B656 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav18A0A075B656 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav18A0A075B656 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trav18A0A075B656 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav18A0A075B656 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trav18A0A075B656 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav18A0A075B656 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav18A0A075B656 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav18A0A075B656 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav18A0A075B656 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav18A0A075B656 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav18A0A075B656 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav18A0A075B656 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.84■□□□□ 0.61
Trav18A0A075B656 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav18A0A075B656 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Trav18A0A075B656 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav18A0A075B656 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav18A0A075B656 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav18A0A075B656 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav18A0A075B656 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav18A0A075B656 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav18A0A075B656 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav18A0A075B656 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav18A0A075B656 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav18A0A075B656 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav18A0A075B656 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Trav18A0A075B656 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav18A0A075B656 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav18A0A075B656 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav18A0A075B656 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav18A0A075B656 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Trav18A0A075B656 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav18A0A075B656 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav18A0A075B656 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav18A0A075B656 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav18A0A075B656 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav18A0A075B656 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trav18A0A075B656 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav18A0A075B656 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trav18A0A075B656 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav18A0A075B656 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trav18A0A075B656 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav18A0A075B656 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav18A0A075B656 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav18A0A075B656 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav18A0A075B656 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav18A0A075B656 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Trav18A0A075B656 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trav18A0A075B656 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Trav18A0A075B656 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav18A0A075B656 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Trav18A0A075B656 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 151.8 ms