Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18,97■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18,97■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18,96■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 AC157572.2-201ENSMUST00000226970 908 ntBASIC18,96■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18,96■□□□□ 0,63
Trav15-2-dv6-2A0A075B650 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18,95■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18,95■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18,95■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18,94■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18,94■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18,94■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18,94■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18,94■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18,93■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18,93■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Gm37847-201ENSMUST00000192163 1497 ntBASIC18,93■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Gm31748-201ENSMUST00000194938 1497 ntBASIC18,93■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18,93■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18,93■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18,93■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18,92■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18,92■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18,92■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18,92■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18,92■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18,91■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18,91■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18,91■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18,91■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18,91■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18,91■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18,91■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18,91■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18,91■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18,9■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18,9■□□□□ 0,62
Trav15-2-dv6-2A0A075B650 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18,89■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18,89■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18,89■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18,89■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18,89■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18,88■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18,87■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18,87■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18,87■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18,87■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18,86■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18,86■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18,86■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18,86■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Particl-201ENSMUST00000205370 1560 ntBASIC18,86■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18,86■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18,86■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18,86■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18,85■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18,84■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18,84■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18,84■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18,84■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Gm30023-201ENSMUST00000197970 889 ntBASIC18,84■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18,84■□□□□ 0,61
Trav15-2-dv6-2A0A075B650 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18,82■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18,82■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18,82■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18,81■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18,81■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18,81■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18,81■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18,81■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18,81■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18,8■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18,8■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18,8■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18,8■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18,79■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18,79■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18,79■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18,79■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18,79■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18,79■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18,78■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18,78■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18,78■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18,78■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18,78■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18,78■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Zfp131-205ENSMUST00000223812 663 ntBASIC18,78■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18,78■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Gm17641-201ENSMUST00000166328 2350 ntBASIC18,77■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18,77■□□□□ 0,6
Trav15-2-dv6-2A0A075B650 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18,77■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18,76■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18,76■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18,76■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18,76■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18,76■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18,76■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18,76■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18,75■□□□□ 0,59
Trav15-2-dv6-2A0A075B650 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18,75■□□□□ 0,59
Retrieved 100 of 76,532 protein–RNA pairs in 13,7 ms