Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9-1A0A075B601 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9-1A0A075B601 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9-1A0A075B601 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9-1A0A075B601 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9-1A0A075B601 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trav9-1A0A075B601 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav9-1A0A075B601 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.05■□□□□ 0.48
Trav9-1A0A075B601 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav9-1A0A075B601 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav9-1A0A075B601 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav9-1A0A075B601 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav9-1A0A075B601 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav9-1A0A075B601 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav9-1A0A075B601 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9-1A0A075B601 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9-1A0A075B601 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9-1A0A075B601 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trav9-1A0A075B601 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav9-1A0A075B601 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trav9-1A0A075B601 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav9-1A0A075B601 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav9-1A0A075B601 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav9-1A0A075B601 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav9-1A0A075B601 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav9-1A0A075B601 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav9-1A0A075B601 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav9-1A0A075B601 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9-1A0A075B601 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9-1A0A075B601 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9-1A0A075B601 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9-1A0A075B601 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9-1A0A075B601 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Trav9-1A0A075B601 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Trav9-1A0A075B601 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav9-1A0A075B601 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav9-1A0A075B601 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav9-1A0A075B601 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav9-1A0A075B601 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav9-1A0A075B601 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav9-1A0A075B601 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav9-1A0A075B601 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav9-1A0A075B601 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav9-1A0A075B601 Particl-201ENSMUST00000205370 1560 ntBASIC17.97■□□□□ 0.47
Trav9-1A0A075B601 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav9-1A0A075B601 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav9-1A0A075B601 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav9-1A0A075B601 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav9-1A0A075B601 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav9-1A0A075B601 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav9-1A0A075B601 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
Trav9-1A0A075B601 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav9-1A0A075B601 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav9-1A0A075B601 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav9-1A0A075B601 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.95■□□□□ 0.46
Trav9-1A0A075B601 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav9-1A0A075B601 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trav9-1A0A075B601 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9-1A0A075B601 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9-1A0A075B601 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav9-1A0A075B601 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.93■□□□□ 0.46
Trav9-1A0A075B601 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav9-1A0A075B601 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav9-1A0A075B601 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trav9-1A0A075B601 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav9-1A0A075B601 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav9-1A0A075B601 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav9-1A0A075B601 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav9-1A0A075B601 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav9-1A0A075B601 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav9-1A0A075B601 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav9-1A0A075B601 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trav9-1A0A075B601 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav9-1A0A075B601 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav9-1A0A075B601 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav9-1A0A075B601 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav9-1A0A075B601 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9-1A0A075B601 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9-1A0A075B601 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav9-1A0A075B601 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.89■□□□□ 0.45
Trav9-1A0A075B601 Nkain2-201ENSMUST00000092602 558 ntBASIC17.89■□□□□ 0.45
Trav9-1A0A075B601 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav9-1A0A075B601 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9-1A0A075B601 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9-1A0A075B601 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9-1A0A075B601 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9-1A0A075B601 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav9-1A0A075B601 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Trav9-1A0A075B601 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav9-1A0A075B601 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav9-1A0A075B601 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trav9-1A0A075B601 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9-1A0A075B601 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9-1A0A075B601 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.86■□□□□ 0.45
Trav9-1A0A075B601 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Trav9-1A0A075B601 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9-1A0A075B601 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9-1A0A075B601 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9-1A0A075B601 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav9-1A0A075B601 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms