Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 OR4K8P-201ENST00000578842 1048 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 AC105224.1-201ENST00000587055 421 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 VN1R74P-201ENST00000613259 503 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 UCA1.1-201ENST00000620952 75 ntBASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.31□□□□□ -2.04
USH1CQ9Y6N9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 RNU4-52P-201ENST00000384209 138 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 TAS2R15P-201ENST00000390674 928 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC090774.1-201ENST00000435925 246 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 THAP5P1-201ENST00000439089 262 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 SNORD109B-201ENST00000458961 67 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 SNORD109A-201ENST00000459128 67 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC114322.1-201ENST00000506771 926 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC087276.1-201ENST00000529659 480 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC006518.2-201ENST00000542513 940 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 MTCYBP27-201ENST00000555160 670 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 HMGB1P14-201ENST00000557424 591 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC079148.1-201ENST00000565944 819 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC010546.1-201ENST00000569391 485 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AP003973.1-201ENST00000604639 691 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 MIR8084-201ENST00000614105 89 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AL160394.1-201ENST00000624765 724 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 AC016717.2-201ENST00000609089 5141 ntBASIC2.3□□□□□ -2.04
USH1CQ9Y6N9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC004944.1-201ENST00000517807 3059 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 RNU6-492P-201ENST00000363035 104 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 OR5H15-201ENST00000383696 930 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 RNU6-549P-201ENST00000384433 107 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AL359511.1-201ENST00000402970 211 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 MIR1290-201ENST00000408735 78 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 RNA5SP184-201ENST00000411071 108 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AL512637.2-201ENST00000431287 1256 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 RPL31P41-201ENST00000477967 372 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 XKRY-201ENST00000510392 1100 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 RN7SKP132-201ENST00000516001 208 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC103783.1-201ENST00000520506 373 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC093510.2-201ENST00000562820 896 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC105137.2-201ENST00000569073 466 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 MIR3162-201ENST00000581818 82 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 OR1M4P-201ENST00000589199 287 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 TUG1_1.1-201ENST00000610654 145 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC004852.3-201ENST00000614131 326 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC006213.4-201ENST00000616184 634 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC097460.3-201ENST00000623099 442 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AC092608.2-201ENST00000624427 218 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 MIR1291-201ENST00000627649 87 ntBASIC2.29□□□□□ -2.04
USH1CQ9Y6N9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 RNU6-270P-201ENST00000364131 105 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 MIR217-201ENST00000384817 110 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 MIR518C-201ENST00000384822 101 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 MIR767-201ENST00000390228 109 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 HMGB3P2-201ENST00000411913 584 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 BX664727.1-201ENST00000416024 466 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC063976.3-201ENST00000426849 329 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms