Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
COX11Q9Y6N1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
COX11Q9Y6N1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
COX11Q9Y6N1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
COX11Q9Y6N1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.62□□□□□ -1.83
COX11Q9Y6N1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 RNU6-960P-201ENST00000364056 120 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 RNU6-1078P-201ENST00000364522 103 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 Y_RNA.447-201ENST00000384184 113 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 RNU6-823P-201ENST00000391042 103 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AL445189.1-201ENST00000405722 338 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 MIR548I3-201ENST00000408378 149 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 MIR548I1-201ENST00000408810 149 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 RNU6-101P-201ENST00000410323 104 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 SRSF1P1-201ENST00000424058 520 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 RPL36AP6-201ENST00000435770 321 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC005094.1-201ENST00000440420 368 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 MTCO3P45-201ENST00000443036 613 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AP000281.1-201ENST00000444036 316 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 EEF1A1P1-201ENST00000447052 739 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC239809.1-201ENST00000450470 217 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 HMGB3P30-201ENST00000457863 606 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC008571.1-201ENST00000467232 300 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 RN7SL547P-201ENST00000490793 290 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 RPL23AP55-201ENST00000498163 452 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 IGLV2-28-201ENST00000520681 304 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 IGKV2-18-201ENST00000522607 343 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC005868.1-201ENST00000536421 331 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AP006289.1-201ENST00000538089 277 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC090115.3-201ENST00000553218 849 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AL121576.1-201ENST00000556055 276 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AP005403.1-201ENST00000579720 229 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 SUMO2P15-201ENST00000604285 278 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC243312.2-201ENST00000623340 601 ntBASIC3.61□□□□□ -1.83
COX11Q9Y6N1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.61□□□□□ -1.83
COX11Q9Y6N1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 Y_RNA.2-201ENST00000362330 96 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 RNU1-130P-201ENST00000363930 160 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 RNU6-209P-201ENST00000384118 107 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 RNU6-432P-201ENST00000384196 109 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 Y_RNA.493-201ENST00000384422 102 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 SNORA16.2-201ENST00000390991 127 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AL583834.1-201ENST00000406943 343 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 MIR1286-201ENST00000408112 78 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 RNU6-516P-201ENST00000411381 104 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 USP9YP30-201ENST00000430729 455 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 GAPDHP58-201ENST00000438477 1006 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 RPL21P2-201ENST00000440049 481 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AL390119.1-201ENST00000440329 312 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 RPS17P13-201ENST00000448974 407 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AL354710.1-201ENST00000453641 246 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 RPL36AP13-201ENST00000457490 317 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AC117503.1-201ENST00000472241 394 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 RPL22P13-201ENST00000493291 347 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 FTH1P24-201ENST00000503502 462 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 HIGD1AP14-201ENST00000507617 282 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AC116655.1-201ENST00000508324 901 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AP000827.1-201ENST00000527814 258 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 RANP3-201ENST00000530970 276 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.6□□□□□ -1.83
COX11Q9Y6N1 GNAI2P1-201ENST00000541815 315 ntBASIC3.6□□□□□ -1.83
COX11Q9Y6N1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms