Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC105417.1-201ENST00000514691 285 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 RNA5SP143-201ENST00000516936 115 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC135001.1-201ENST00000544546 283 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC034105.3-201ENST00000565294 442 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 MIR4697-201ENST00000582977 78 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC006116.10-201ENST00000591836 581 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 NRBF2P5-201ENST00000603087 788 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AL022099.1-201ENST00000604551 712 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC012443.1-201ENST00000605605 231 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AL121992.2-201ENST00000606262 256 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AL591424.2-201ENST00000617023 128 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC022306.2-201ENST00000617563 647 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 MTND5P17-201ENST00000418405 1603 ntBASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHA3Q9Y5H8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 EXOC5P1-201ENST00000510543 1969 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 Y_RNA.303-201ENST00000364998 94 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 Y_RNA.381-201ENST00000365666 102 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-76P-201ENST00000384060 104 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 HMGN2P8-201ENST00000391458 268 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 RNA5SP239-201ENST00000410218 129 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AL109913.1-201ENST00000421173 514 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 GTF2IP20-201ENST00000431663 360 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AL359073.1-201ENST00000448036 403 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AL500522.2-201ENST00000448562 343 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 RPS11P1-201ENST00000451072 473 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 RNU7-63P-201ENST00000459054 62 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 RN7SL93P-201ENST00000463035 293 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 RPS23P7-201ENST00000466210 444 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 RN7SL385P-201ENST00000468873 276 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 UQCRHP4-201ENST00000471686 272 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC110792.1-201ENST00000491826 472 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC116562.3-201ENST00000506136 177 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-1092P-201ENST00000516955 87 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 SNORA31.20-201ENST00000517111 133 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AP001646.1-201ENST00000527936 915 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC068587.5-201ENST00000528506 175 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC055876.1-202ENST00000567053 138 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC010591.1-201ENST00000603941 649 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC004696.1-201ENST00000614345 607 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 YWHAEP7-203ENST00000622054 312 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 AC138649.5-201ENST00000637456 137 ntBASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHA3Q9Y5H8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHA3Q9Y5H8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PCDHA3Q9Y5H8 AC008725.1-201ENST00000605123 2263 ntBASIC4.15□□□□□ -1.74
PCDHA3Q9Y5H8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHA3Q9Y5H8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PCDHA3Q9Y5H8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 RPL32P3-201ENST00000359025 275 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 RNA5SP399-201ENST00000364003 117 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC110754.1-201ENST00000399740 601 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 TXNP7-201ENST00000406296 293 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC138393.2-201ENST00000414742 246 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL138799.3-201ENST00000438968 350 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 GAPDHP27-201ENST00000447427 1020 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 MTND3P10-201ENST00000450967 341 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 RPS24P6-201ENST00000452670 400 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC010631.1-201ENST00000474150 156 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC026427.2-201ENST00000506228 536 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC117522.1-201ENST00000509821 380 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC108043.1-201ENST00000512696 574 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms