Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 SNORD27-201ENST00000363981 72 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 U3.13-201ENST00000364804 214 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 Y_RNA.555-201ENST00000384673 110 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 LAP3P1-201ENST00000403648 294 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-1025P-201ENST00000410629 104 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU2-25P-201ENST00000411041 191 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 OR2AT2P-201ENST00000413438 905 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 RPEP5-201ENST00000441137 268 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 RPL30P10-201ENST00000488148 337 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 SNORA31.6-201ENST00000516241 130 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 RNA5SP471-201ENST00000516971 106 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 SNORA43.3-201ENST00000517240 103 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 PRPF19P1-201ENST00000584766 898 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 MIR7853-201ENST00000584820 132 ntBASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
PCDHGA11Q9Y5H2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PCDHGA11Q9Y5H2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
PCDHGA11Q9Y5H2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AC114947.2-201ENST00000565748 2125 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AL031595.2-201ENST00000624215 19071 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AC007685.1-201ENST00000329806 452 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 MIR335-201ENST00000362173 94 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 MTCYBP2-201ENST00000407745 171 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 C4BPAP2-201ENST00000428434 478 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 OR51K1P-201ENST00000510214 950 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 SNORA81.3-201ENST00000517283 198 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AC021006.3-201ENST00000530771 192 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 U2.22-201ENST00000636441 106 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AL365440.1-201ENST00000436135 2167 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 AL138820.1-201ENST00000617901 5305 ntBASIC5.33□□□□□ -1.56
PCDHGA11Q9Y5H2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 Y_RNA.27-201ENST00000362540 103 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 SNORD56.6-201ENST00000384569 71 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AL080315.1-201ENST00000406055 466 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 RNU6-1203P-201ENST00000410703 110 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 SNORD56-201ENST00000413522 71 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AC087650.1-201ENST00000431445 468 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AL163193.1-201ENST00000444895 788 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 RPL7P5-201ENST00000471472 736 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 RN7SL583P-201ENST00000475692 287 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 MED28P2-201ENST00000475771 317 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 RPS4XP1-201ENST00000482189 787 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AC091912.1-201ENST00000511351 248 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 RNU6-406P-201ENST00000516470 107 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 MIR4458-201ENST00000578872 75 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AC009779.6-201ENST00000603972 165 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.32□□□□□ -1.56
PCDHGA11Q9Y5H2 AP005431.1-201ENST00000618479 319 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms