Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 RNU6-281P-201ENST00000384212 103 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 RNU6-1145P-201ENST00000384246 107 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 Y_RNA.525-201ENST00000384570 113 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 MIR10A-201ENST00000385043 110 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 SNORD37.2-201ENST00000391075 66 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 RNU6-1001P-201ENST00000411265 100 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 BX276092.4-201ENST00000452056 248 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 RPL21P126-201ENST00000470049 478 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 AC022206.1-201ENST00000495947 347 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 ZNF519P4-201ENST00000514008 125 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 RN7SKP164-201ENST00000516138 266 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 SNORA31.22-201ENST00000517204 135 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 AL133399.1-201ENST00000527476 298 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 AC084851.1-201ENST00000529105 249 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 MIR4675-201ENST00000577898 77 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 MIR4782-201ENST00000577987 79 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 MIR5695-201ENST00000579717 85 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 MIR4302-201ENST00000638058 60 ntBASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHGA4Q9Y5G9 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 RNU6-103P-201ENST00000363686 107 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 LCN1P2-201ENST00000372030 223 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AL450023.1-201ENST00000450868 751 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 RN7SL214P-201ENST00000487317 265 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AC006499.6-201ENST00000511169 607 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AC100767.1-201ENST00000528178 123 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AC090877.1-201ENST00000561418 344 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 MIR3145-201ENST00000580727 82 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AP001340.1-201ENST00000624405 217 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 LINC02495-203ENST00000636704 242 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AC110373.1-201ENST00000505994 3505 ntBASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHGA4Q9Y5G9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 RNU5A-1-201ENST00000362698 116 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 MIR10B-201ENST00000385011 110 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 MIR329-1-201ENST00000385028 80 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 RNU6-1248P-201ENST00000391096 64 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 ADAM24P-201ENST00000398655 2101 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 RAB9AP3-201ENST00000412737 573 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AL354868.1-201ENST00000417077 482 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AL354707.3-201ENST00000427308 331 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 RAB9AP1-201ENST00000449393 573 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 AC108161.1-201ENST00000461060 402 ntBASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHGA4Q9Y5G9 SCARNA21.2-201ENST00000516600 166 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms