Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC118942.1-201ENST00000529674 1035 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 MIR4635-201ENST00000583759 79 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AC104763.3-201ENST00000613765 618 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AL590099.1-201ENST00000615276 138 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 MIR6130-201ENST00000619419 109 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 CR381653.2-201ENST00000624041 768 ntBASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CDH9Q9ULB4 AC005832.2-201ENST00000538921 1430 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 RNU5A-1-201ENST00000362698 116 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 MIR181B1-201ENST00000385240 110 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 RNU6-1000P-201ENST00000391066 106 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AL356320.2-201ENST00000417263 507 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AL139421.1-201ENST00000423010 169 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC090774.1-201ENST00000435925 246 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 LSM1P1-201ENST00000438629 273 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 ARPC3P5-201ENST00000448802 534 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 HSPE1P6-201ENST00000479457 291 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 RPL21P131-201ENST00000497298 483 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 XKRY-201ENST00000510392 1100 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 RNU6-528P-201ENST00000516926 100 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC010376.1-201ENST00000522101 334 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC005832.3-201ENST00000537929 631 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 HSPE1P20-201ENST00000538133 289 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC125611.2-201ENST00000551907 647 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 HMGB1P14-201ENST00000557424 591 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC090695.1-201ENST00000561269 1222 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AADACP1-206ENST00000561502 1193 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AL132657.2-201ENST00000564417 358 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 ACTR3BP3-201ENST00000565577 979 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 MTND3P13-201ENST00000574391 343 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC023043.3-201ENST00000593113 385 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AP001429.1-201ENST00000602568 530 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC107871.2-201ENST00000612894 502 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AL136360.1-201ENST00000503377 1900 ntBASIC2.8□□□□□ -1.96
CDH9Q9ULB4 AP000526.1-201ENST00000603308 1388 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AL139039.1-201ENST00000401900 692 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AL590084.1-201ENST00000407885 387 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 RPLP0P7-201ENST00000416050 667 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH9Q9ULB4 HMGN2P30-201ENST00000423237 256 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AL356867.1-201ENST00000429623 299 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH9Q9ULB4 RPL23AP20-201ENST00000447965 421 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 GSTA11P-201ENST00000452866 669 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AC147055.4-201ENST00000504399 745 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AC009901.1-201ENST00000506703 541 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH9Q9ULB4 RNA5SP76-201ENST00000516277 87 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH9Q9ULB4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH9Q9ULB4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AL355836.1-201ENST00000555951 870 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.79□□□□□ -1.96
CDH9Q9ULB4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 DNAJC19P3-201ENST00000594491 331 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AC011451.2-201ENST00000604303 598 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AL133507.1-201ENST00000605269 557 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 RPL23AP88-201ENST00000605759 454 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AC090132.2-201ENST00000615881 347 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AL357080.1-201ENST00000617394 239 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AC002550.2-201ENST00000621246 394 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 AL079343.1-201ENST00000572358 1771 ntBASIC2.79□□□□□ -1.96
CDH9Q9ULB4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.79□□□□□ -1.96
CDH9Q9ULB4 MTCO1P9-201ENST00000505577 1534 ntBASIC2.78□□□□□ -1.96
CDH9Q9ULB4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
CDH9Q9ULB4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDH9Q9ULB4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDH9Q9ULB4 AL590004.2-201ENST00000404787 371 ntBASIC2.78□□□□□ -1.96
CDH9Q9ULB4 RNA5SP492-201ENST00000411330 114 ntBASIC2.78□□□□□ -1.96
CDH9Q9ULB4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.78□□□□□ -1.96
CDH9Q9ULB4 AL449283.1-202ENST00000418249 604 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms