Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.55□□□□□ -2
RIMBP3Q9UFD9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
RIMBP3Q9UFD9 SNORA51.12-201ENST00000384448 134 ntBASIC2.55□□□□□ -2
RIMBP3Q9UFD9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.55□□□□□ -2
RIMBP3Q9UFD9 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.55□□□□□ -2
RIMBP3Q9UFD9 ARPC3P2-201ENST00000457786 533 ntBASIC2.55□□□□□ -2
RIMBP3Q9UFD9 AC146507.1-201ENST00000468335 354 ntBASIC2.55□□□□□ -2
RIMBP3Q9UFD9 COX6CP14-201ENST00000469580 174 ntBASIC2.55□□□□□ -2
RIMBP3Q9UFD9 FABP5P6-201ENST00000510588 409 ntBASIC2.55□□□□□ -2
RIMBP3Q9UFD9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.55□□□□□ -2
RIMBP3Q9UFD9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.55□□□□□ -2
RIMBP3Q9UFD9 AC009950.2-201ENST00000636548 183 ntBASIC2.55□□□□□ -2
RIMBP3Q9UFD9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RIMBP3Q9UFD9 RNA5SP189-201ENST00000364920 115 ntBASIC2.54□□□□□ -2
RIMBP3Q9UFD9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.54□□□□□ -2
RIMBP3Q9UFD9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.54□□□□□ -2
RIMBP3Q9UFD9 ARL5AP2-201ENST00000444698 533 ntBASIC2.54□□□□□ -2
RIMBP3Q9UFD9 RFC5P1-201ENST00000454419 874 ntBASIC2.54□□□□□ -2
RIMBP3Q9UFD9 AC245036.5-201ENST00000596330 847 ntBASIC2.54□□□□□ -2
RIMBP3Q9UFD9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.54□□□□□ -2
RIMBP3Q9UFD9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.54□□□□□ -2
RIMBP3Q9UFD9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RIMBP3Q9UFD9 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.54□□□□□ -2
RIMBP3Q9UFD9 RNU6-516P-201ENST00000411381 104 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AL354695.1-201ENST00000427935 228 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AL021397.1-201ENST00000451806 248 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC025033.1-201ENST00000463883 194 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC108120.2-201ENST00000512973 294 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC104986.1-201ENST00000517978 436 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 OR6C73P-201ENST00000546432 358 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC010615.3-201ENST00000597319 394 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC016727.2-201ENST00000603988 621 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC005021.1-201ENST00000608730 355 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC011472.4-201ENST00000615848 491 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AL590410.1-201ENST00000617925 333 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC008133.2-201ENST00000624540 351 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC006026.1-201ENST00000444025 1803 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 SNORD114-27-201ENST00000363766 70 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 SNORA67.6-201ENST00000391093 99 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.53□□□□□ -2
RIMBP3Q9UFD9 UBE2V1P6-201ENST00000430840 422 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.53□□□□□ -2
RIMBP3Q9UFD9 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.53□□□□□ -2
RIMBP3Q9UFD9 TRAV28-201ENST00000557548 323 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC104581.2-201ENST00000572227 430 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 MTND4LP24-201ENST00000572277 291 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.53□□□□□ -2
RIMBP3Q9UFD9 RPL23AP88-201ENST00000605759 454 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 AC034102.8-201ENST00000615146 484 ntBASIC2.53□□□□□ -2
RIMBP3Q9UFD9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AL157700.1-201ENST00000561973 1432 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AC004022.2-201ENST00000413824 193 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 CKS1BP5-201ENST00000434172 273 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AL590664.1-201ENST00000448065 339 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AC012181.1-201ENST00000479895 423 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AC019176.1-201ENST00000518519 225 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AC139103.1-201ENST00000534696 1030 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AC007375.1-201ENST00000554513 578 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AC092954.1-201ENST00000609121 445 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 uc_338.12-201ENST00000616344 181 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AC006065.5-201ENST00000623427 349 ntBASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RIMBP3Q9UFD9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 RPS6P15-201ENST00000431996 751 ntBASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 RPL37P6-202ENST00000464216 403 ntBASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 PRELID2P1-201ENST00000552837 301 ntBASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 AL133393.1-201ENST00000603277 287 ntBASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
RIMBP3Q9UFD9 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RIMBP3Q9UFD9 HAR1A.1-201ENST00000459583 118 ntBASIC2.5□□□□□ -2.01
RIMBP3Q9UFD9 SNORA31.24-201ENST00000517232 57 ntBASIC2.5□□□□□ -2.01
RIMBP3Q9UFD9 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.5□□□□□ -2.01
RIMBP3Q9UFD9 EIF4EP5-201ENST00000528228 640 ntBASIC2.5□□□□□ -2.01
RIMBP3Q9UFD9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.5□□□□□ -2.01
RIMBP3Q9UFD9 CENPUP2-201ENST00000555897 1186 ntBASIC2.5□□□□□ -2.01
RIMBP3Q9UFD9 AC109446.2-201ENST00000567872 497 ntBASIC2.5□□□□□ -2.01
RIMBP3Q9UFD9 AC069304.3-201ENST00000603938 1084 ntBASIC2.5□□□□□ -2.01
RIMBP3Q9UFD9 AC090525.3-201ENST00000605601 189 ntBASIC2.5□□□□□ -2.01
RIMBP3Q9UFD9 AC011890.2-201ENST00000613393 294 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms