Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AC034105.3-201ENST00000565294 442 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 ATP1B3P1-201ENST00000605365 821 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AC080013.4-201ENST00000607624 649 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 PART1_2.1-201ENST00000612397 250 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 MIR6076-201ENST00000617521 113 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AC011330.2-201ENST00000621680 635 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 AC109315.1-201ENST00000584143 1347 ntBASIC3.32□□□□□ -1.88
CLIP2Q9UDT6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 RNU6-1155P-201ENST00000363554 107 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 Y_RNA.500-201ENST00000384466 111 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 TAS2R15P-201ENST00000390674 928 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 RPL21P75-201ENST00000396599 483 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 SNRPEP2-201ENST00000397592 279 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 RPL21P28-201ENST00000401418 483 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AL592114.1-201ENST00000403842 483 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 HIGD1AP15-201ENST00000416198 280 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AL449283.1-202ENST00000418249 604 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC016907.1-201ENST00000419483 435 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 NANOGP5-201ENST00000424456 877 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 MTCO1P39-201ENST00000426148 480 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 MTCO1P53-201ENST00000441633 699 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC112653.1-201ENST00000443851 386 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 RPL39P40-201ENST00000445481 146 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 Z82190.1-201ENST00000454534 490 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 RPL21P39-201ENST00000463605 483 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC011979.1-201ENST00000472300 483 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 RPL21P93-201ENST00000480465 489 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC233702.1-201ENST00000482905 502 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC087190.1-201ENST00000484462 480 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC093591.1-201ENST00000491435 481 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 RPL21P16-201ENST00000495531 483 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 RPL21P131-201ENST00000497298 483 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 SLC2A13P1-201ENST00000531560 322 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 MRPS36P5-201ENST00000551909 298 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 DNAJC8P1-201ENST00000554535 372 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AP005205.1-201ENST00000563503 508 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 HMGB1P6-201ENST00000569046 646 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 MTND3P13-201ENST00000574391 343 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 FAM60BP-201ENST00000578364 658 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC023043.3-201ENST00000593113 385 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AL353778.1-201ENST00000603149 408 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 DUXAP3-201ENST00000603616 594 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC006023.1-201ENST00000603944 259 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC009570.1-201ENST00000609599 745 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC004696.1-201ENST00000614345 607 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AL158163.2-201ENST00000619110 700 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC004009.2-201ENST00000623016 728 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AC139792.2-201ENST00000624218 587 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 AL161431.1-201ENST00000618966 4205 ntBASIC3.31□□□□□ -1.88
CLIP2Q9UDT6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC097714.1-201ENST00000511272 1647 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AL390862.1-201ENST00000635467 1469 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 RNU1-35P-201ENST00000362782 153 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 SNORA14A-201ENST00000364773 135 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 CD24P4-201ENST00000382840 243 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 RNY3P9-201ENST00000384727 106 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 RNU6-1242P-201ENST00000391052 103 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 TXNL1P1-201ENST00000429528 554 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 MTND4P32-201ENST00000437189 1237 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 THAP5P1-201ENST00000439089 262 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 RPL23AP58-201ENST00000440453 469 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 OR10R1P-201ENST00000441524 1141 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC108938.1-201ENST00000451204 136 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 TRGVB-201ENST00000453257 471 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 RNA5SP310-201ENST00000459084 116 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC090453.1-201ENST00000495560 436 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 COX7A2P2-201ENST00000505291 250 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC105313.1-201ENST00000509121 353 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 MTCO1P47-201ENST00000523889 1271 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC005832.3-201ENST00000537929 631 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC135279.1-201ENST00000543493 504 ntBASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.3□□□□□ -1.88
CLIP2Q9UDT6 SETP2-201ENST00000553886 926 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms