Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
CHD7Q9P2D1 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.33□□□□□ -2.2
CHD7Q9P2D1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.33□□□□□ -2.2
CHD7Q9P2D1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.33□□□□□ -2.2
CHD7Q9P2D1 AC109780.2-201ENST00000413467 845 ntBASIC1.33□□□□□ -2.2
CHD7Q9P2D1 AL357078.2-201ENST00000416486 427 ntBASIC1.33□□□□□ -2.2
CHD7Q9P2D1 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.33□□□□□ -2.2
CHD7Q9P2D1 RPS15AP1-201ENST00000457423 391 ntBASIC1.33□□□□□ -2.2
CHD7Q9P2D1 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CHD7Q9P2D1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.33□□□□□ -2.2
CHD7Q9P2D1 RNU6-84P-201ENST00000607737 102 ntBASIC1.33□□□□□ -2.2
CHD7Q9P2D1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.33□□□□□ -2.2
CHD7Q9P2D1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CHD7Q9P2D1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 Y_RNA.115-201ENST00000363272 98 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 RPL26P37-201ENST00000411983 438 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AC008127.2-201ENST00000549925 1075 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 HMGN2P38-201ENST00000423806 265 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 SNRPGP13-201ENST00000442212 177 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AC005912.1-201ENST00000495392 255 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 NPM1P52-201ENST00000518264 846 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AC025755.1-201ENST00000521306 278 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 DUXAP5-201ENST00000529668 529 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.32□□□□□ -2.2
CHD7Q9P2D1 C2orf27A-204ENST00000623058 969 ntBASIC1.32□□□□□ -2.2
CHD7Q9P2D1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
CHD7Q9P2D1 RNA5SP393-201ENST00000363423 117 ntBASIC1.31□□□□□ -2.2
CHD7Q9P2D1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CHD7Q9P2D1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.31□□□□□ -2.2
CHD7Q9P2D1 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.31□□□□□ -2.2
CHD7Q9P2D1 GLUD1P4-201ENST00000590914 418 ntBASIC1.31□□□□□ -2.2
CHD7Q9P2D1 AC013553.2-201ENST00000604244 589 ntBASIC1.31□□□□□ -2.2
CHD7Q9P2D1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CHD7Q9P2D1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CHD7Q9P2D1 AL359851.1-201ENST00000569460 4997 ntBASIC1.31□□□□□ -2.2
CHD7Q9P2D1 AC111188.2-201ENST00000529697 1387 ntBASIC1.31□□□□□ -2.2
CHD7Q9P2D1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.31□□□□□ -2.2
CHD7Q9P2D1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.31□□□□□ -2.2
CHD7Q9P2D1 SNORD121B-201ENST00000458838 81 ntBASIC1.31□□□□□ -2.2
CHD7Q9P2D1 AC090515.1-201ENST00000465295 476 ntBASIC1.31□□□□□ -2.2
CHD7Q9P2D1 RNA5SP337-201ENST00000517007 109 ntBASIC1.31□□□□□ -2.2
CHD7Q9P2D1 AC011890.2-201ENST00000613393 294 ntBASIC1.31□□□□□ -2.2
CHD7Q9P2D1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CHD7Q9P2D1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CHD7Q9P2D1 U3.15-201ENST00000365398 212 ntBASIC1.3□□□□□ -2.2
CHD7Q9P2D1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.3□□□□□ -2.2
CHD7Q9P2D1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CHD7Q9P2D1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.3□□□□□ -2.2
CHD7Q9P2D1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.3□□□□□ -2.2
CHD7Q9P2D1 AC108059.3-201ENST00000456388 214 ntBASIC1.3□□□□□ -2.2
CHD7Q9P2D1 RPS26P21-201ENST00000475397 348 ntBASIC1.3□□□□□ -2.2
CHD7Q9P2D1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.3□□□□□ -2.2
CHD7Q9P2D1 RPL23AP88-201ENST00000605759 454 ntBASIC1.3□□□□□ -2.2
CHD7Q9P2D1 AC096772.1-201ENST00000609146 564 ntBASIC1.3□□□□□ -2.2
CHD7Q9P2D1 HSPE1P11-201ENST00000339579 310 ntBASIC1.3□□□□□ -2.2
CHD7Q9P2D1 AL109741.2-201ENST00000455561 343 ntBASIC1.3□□□□□ -2.2
CHD7Q9P2D1 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
CHD7Q9P2D1 SETP7-201ENST00000552169 453 ntBASIC1.3□□□□□ -2.2
CHD7Q9P2D1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.3□□□□□ -2.2
CHD7Q9P2D1 RNU4-91P-201ENST00000364778 135 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 Z85994.2-201ENST00000434327 452 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AL449363.1-201ENST00000617815 186 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AC073264.1-201ENST00000411508 416 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 UBE2V2P1-201ENST00000434717 398 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 XKRYP6-201ENST00000440468 1116 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 XKRYP3-201ENST00000442113 1116 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AC121758.2-201ENST00000553271 193 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AC006270.2-201ENST00000578523 652 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AL136164.4-201ENST00000625013 2135 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 RNA5SP82-201ENST00000516707 92 ntBASIC1.29□□□□□ -2.2
CHD7Q9P2D1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.29□□□□□ -2.2
CHD7Q9P2D1 7SK.7-201ENST00000603504 247 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms