Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 RNA5SP46-201ENST00000362370 120 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 RNA5SP30-201ENST00000365552 115 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 RNU6-637P-201ENST00000384050 107 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 RNU6-1154P-201ENST00000391001 104 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 RNU6-700P-201ENST00000391043 107 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 RNU11-4P-201ENST00000391149 133 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 Y_RNA.629-201ENST00000411368 105 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 RPL19P1-201ENST00000411635 428 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 BX276092.6-201ENST00000430476 250 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AC073063.1-201ENST00000434352 607 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 BX276092.8-201ENST00000455722 250 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 HMGB1P25-201ENST00000468402 607 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 RN7SL860P-201ENST00000473738 223 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AC093023.1-201ENST00000547375 507 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AC004024.1-201ENST00000549244 247 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AL359219.2-201ENST00000555184 348 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AMZ2P1-203ENST00000565833 850 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 MIR3144-201ENST00000579460 79 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AC090607.5-201ENST00000615692 224 ntBASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.47□□□□□ -1.53
CUEDC1Q9NWM3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CUEDC1Q9NWM3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CUEDC1Q9NWM3 ZNF299P-201ENST00000406845 1804 ntBASIC5.46□□□□□ -1.53
CUEDC1Q9NWM3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 Y_RNA.16-201ENST00000362421 102 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 RNA5SP326-201ENST00000363209 110 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 U3.10-201ENST00000364459 214 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-959P-201ENST00000384671 107 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 RPL11P3-201ENST00000395256 523 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 CYB5AP4-201ENST00000396692 399 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 Y_RNA.626-201ENST00000411288 95 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 BMS1P17-202ENST00000416720 316 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AL662874.1-201ENST00000426065 230 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 MTND3P9-201ENST00000429526 346 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AC016712.1-201ENST00000431088 378 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AL390119.1-201ENST00000440329 312 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 COPS8P2-201ENST00000473228 627 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 RPL7P47-201ENST00000497299 556 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 RPS4XP20-201ENST00000505751 772 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AC074250.1-201ENST00000511117 192 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-615P-201ENST00000516065 106 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 SNORA43.3-201ENST00000517240 103 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 IGLV3-24-201ENST00000517477 197 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 MTND5P41-201ENST00000517498 206 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 CPDP1-201ENST00000579660 283 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 MIR1269B-201ENST00000580405 75 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-85P-201ENST00000605989 107 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AC110801.1-201ENST00000623590 212 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AC138907.8-201ENST00000623981 2256 ntBASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CUEDC1Q9NWM3 AC104964.3-201ENST00000606115 2860 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms