Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MIR7844-201ENST00000616161 122 ntBASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.65□□□□□ -1.83
BLOC1S4Q9NUP1 PWAR6-201ENST00000552334 4618 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 SNORA48.7-201ENST00000391302 135 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 SNORA11-201ENST00000408789 128 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 RN7SKP27-201ENST00000410684 333 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AC009237.5-201ENST00000414271 501 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 Z85995.1-201ENST00000415547 335 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 VPS26BP1-201ENST00000417155 755 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 BX890604.2-201ENST00000427883 474 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 ISCA1P2-201ENST00000438679 421 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 Z75741.1-201ENST00000446793 314 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 RPL21P10-201ENST00000463521 490 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 RPS3AP22-201ENST00000488297 769 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 RNU1-143P-201ENST00000516296 146 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 NRON-201ENST00000517270 370 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 DUXAP2-201ENST00000519198 589 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AC093012.1-202ENST00000549403 582 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AC008015.1-201ENST00000555505 465 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 TRAV28-201ENST00000557548 323 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 NCAPGP2-201ENST00000557911 754 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AMZ2P1-203ENST00000565833 850 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 MIR2682-201ENST00000580305 110 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AC008739.3-201ENST00000603262 127 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 MTCYBP22-201ENST00000603788 447 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AL161729.4-201ENST00000604650 476 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 U1.23-201ENST00000610293 146 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 RNU1-68P-201ENST00000615382 146 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 SNHG22-203ENST00000617833 660 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AC091304.6-201ENST00000619761 202 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AC012150.2-201ENST00000621300 544 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 U1.39-201ENST00000621562 146 ntBASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BLOC1S4Q9NUP1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 RNU6-1035P-201ENST00000384477 107 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 RNA5SP171-201ENST00000391071 115 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AL451054.2-201ENST00000420896 202 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 HSPE1P1-201ENST00000421494 318 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AC011233.1-201ENST00000422812 283 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 CST9LP2-201ENST00000437612 320 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 Z82210.1-201ENST00000440037 231 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 HSPD1P15-201ENST00000505573 1122 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 TTC39CP1-201ENST00000512513 755 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AC116347.2-201ENST00000514912 523 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 RNU6-390P-201ENST00000516259 103 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AP002748.2-201ENST00000528671 348 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 DEFB108A-201ENST00000530110 222 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AP000867.2-201ENST00000532468 320 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 DNAJC8P1-201ENST00000554535 372 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AC034105.3-201ENST00000565294 442 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 GLUD1P4-201ENST00000590914 418 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 CKS1BP3-201ENST00000600888 237 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AC079248.2-201ENST00000623779 326 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 AC073476.4-201ENST00000628409 72 ntBASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
BLOC1S4Q9NUP1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 AL357075.1-201ENST00000404107 726 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 USP9YP26-201ENST00000421008 661 ntBASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
BLOC1S4Q9NUP1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms