Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 RPL23AP42-201ENST00000471152 471 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC072039.1-201ENST00000477611 581 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC022447.3-201ENST00000506865 495 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC023141.11-201ENST00000508864 202 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 HMGB1P47-201ENST00000511281 589 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC008494.2-201ENST00000514544 370 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 POLR2KP1-201ENST00000553226 168 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC090751.1-201ENST00000566966 267 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC040174.2-201ENST00000602701 465 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC025165.5-201ENST00000602802 578 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC103710.4-201ENST00000609301 899 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC005296.1-201ENST00000616145 209 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 AC064859.1-201ENST00000624741 174 ntBASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CDC42SE2Q9NRR3 ELF2P3-201ENST00000445099 1506 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AP006437.1-201ENST00000641440 3685 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 U8.14-201ENST00000390843 143 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 SNORA3.2-201ENST00000408221 125 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 VN1R51P-201ENST00000411675 945 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC098614.2-201ENST00000426040 255 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 NDUFB4P6-201ENST00000436819 366 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 RPL7P36-201ENST00000444633 681 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 snoU13.28-201ENST00000459235 104 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 RPS29P20-201ENST00000489592 171 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC020699.1-201ENST00000505161 445 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 RNA5SP182-201ENST00000516064 82 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC027309.2-201ENST00000520566 192 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 FAM60BP-201ENST00000578364 658 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC078899.2-201ENST00000595282 212 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AL109918.3-201ENST00000603072 338 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 RPAP2P1-201ENST00000603626 1168 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC002487.1-201ENST00000604565 994 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AL355297.2-201ENST00000604792 129 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AP004372.1-201ENST00000604842 844 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AP006248.3-201ENST00000623580 594 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC024023.1-201ENST00000624530 922 ntBASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE2Q9NRR3 AL390862.1-201ENST00000635467 1469 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 RNU6-339P-201ENST00000384310 107 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 UBE2V1P2-201ENST00000397758 440 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 MIR1294-201ENST00000408503 142 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 RNA5SP270-201ENST00000411361 118 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 FCF1P2-201ENST00000415284 583 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC104454.1-201ENST00000421341 1401 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AL645568.3-201ENST00000433683 316 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC010881.1-201ENST00000433830 235 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC004383.1-201ENST00000438135 289 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC017007.3-201ENST00000479865 435 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC079203.1-201ENST00000487972 404 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC034222.1-201ENST00000494052 532 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC111193.1-201ENST00000504097 155 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC008549.1-201ENST00000512900 643 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC118465.1-201ENST00000513820 1271 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 RNU2-19P-201ENST00000517288 84 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC104581.2-201ENST00000572227 430 ntBASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC42SE2Q9NRR3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms