Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 SNORA51.4-201ENST00000364993 124 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 FAT1P1-201ENST00000406588 507 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 RPL23AP58-201ENST00000440453 469 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 EEF1E1P1-201ENST00000446998 430 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 MTND1P31-201ENST00000449206 961 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 USP9YP10-201ENST00000454868 628 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 MEMO1P3-201ENST00000459811 302 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 RN7SKP132-201ENST00000516001 208 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 RNU6-311P-201ENST00000516224 102 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 SNORA70.16-201ENST00000516390 95 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 RNU6-714P-201ENST00000516963 103 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 AL133507.1-201ENST00000605269 557 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 AC007349.4-201ENST00000608114 532 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 AP000484.1-201ENST00000620067 1252 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HPS4Q9NQG7 AC093831.2-201ENST00000624393 3427 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
HPS4Q9NQG7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 CD24P4-201ENST00000382840 243 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 RN7SKP58-201ENST00000411010 305 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 CCDC58P2-201ENST00000417131 366 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 CR769776.1-201ENST00000441254 787 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 RN7SL75P-201ENST00000461926 281 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 SETP11-201ENST00000473027 690 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 RPS26P21-201ENST00000475397 348 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC091951.3-201ENST00000504093 246 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC022483.1-201ENST00000514020 567 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 RNU6-528P-201ENST00000516926 100 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 FAM60DP-201ENST00000524174 632 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AP001804.3-201ENST00000525146 880 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 MTCO2P15-201ENST00000532655 656 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC055876.1-202ENST00000567053 138 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AL353997.4-201ENST00000586196 166 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 RPL23AP78-201ENST00000599928 470 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC019159.1-201ENST00000605094 187 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AL592221.1-201ENST00000605266 382 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AL158042.1-201ENST00000605338 460 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AL591516.1-201ENST00000611326 274 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AC002550.2-201ENST00000621246 394 ntBASIC3.09□□□□□ -1.91
HPS4Q9NQG7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HPS4Q9NQG7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.09□□□□□ -1.92
HPS4Q9NQG7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AL161781.1-201ENST00000354277 403 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 U8.9-201ENST00000365667 134 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 RNU6-83P-201ENST00000384568 112 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 MIR513B-201ENST00000385136 84 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 MIR493-201ENST00000385254 89 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 RPS4XP3-201ENST00000398541 413 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 RPS3AP24-201ENST00000407896 734 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 THAP5P1-201ENST00000439089 262 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AC093156.1-201ENST00000440382 670 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 RPL37P4-201ENST00000448908 268 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 RPL30P9-201ENST00000465586 330 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 RPL30P14-201ENST00000482744 348 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AC093281.2-201ENST00000510153 597 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 RNA5SP367-201ENST00000516557 118 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 RNU6-56P-201ENST00000516986 93 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 MTND1P24-201ENST00000552175 861 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 MIR4506-201ENST00000584693 77 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AC011451.2-201ENST00000604303 598 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AC112220.3-201ENST00000605502 502 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AL450472.3-201ENST00000615578 367 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms