Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AC000089.1-201ENST00000424559 801 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AC019185.3-201ENST00000438805 323 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 snoU13.30-201ENST00000458951 104 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AC005165.2-201ENST00000466070 380 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AC097462.2-201ENST00000504623 481 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AC017037.1-201ENST00000508460 471 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AC008958.1-201ENST00000511047 682 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 FTH1P9-201ENST00000513251 355 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 Y_RNA.668-201ENST00000516233 93 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 IGHV3-76-201ENST00000522465 295 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AL451007.1-201ENST00000595491 289 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AC019159.1-201ENST00000605094 187 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 DLEU2_6.2-201ENST00000620994 136 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RTN4Q9NQC3 AL353743.1-202ENST00000431724 1695 ntBASIC7.06□□□□□ -1.28
RTN4Q9NQC3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 AC092376.2-201ENST00000622621 4116 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 ADAM3A-203ENST00000461344 2157 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 RN7SKP145-201ENST00000363291 303 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 Y_RNA.405-201ENST00000383979 100 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 Y_RNA.451-201ENST00000384200 100 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 Y_RNA.489-201ENST00000384410 101 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 Y_RNA.524-201ENST00000384564 100 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 Y_RNA.561-201ENST00000384694 100 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 MIR1302-6-201ENST00000408466 90 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 AC022206.1-201ENST00000495947 347 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 AC093878.1-201ENST00000515630 432 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 IGKV1D-22-201ENST00000518953 324 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 HNRNPCP8-201ENST00000528764 888 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 SNORD96A-201ENST00000606577 79 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 AC004825.2-201ENST00000616634 455 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 AC091903.1-201ENST00000624322 454 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 ZNF137P-201ENST00000456718 1920 ntBASIC7.05□□□□□ -1.28
RTN4Q9NQC3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RTN4Q9NQC3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AC099548.1-201ENST00000421443 426 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 RPL23AP82-202ENST00000427528 469 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AP000907.1-201ENST00000428428 510 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AL121578.2-201ENST00000448797 447 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 RPL30P14-201ENST00000482744 348 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 RN7SL283P-201ENST00000489055 303 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 OR51K1P-201ENST00000510214 950 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AC074250.1-201ENST00000511117 192 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 RNU6-928P-201ENST00000516876 104 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AC020895.1-201ENST00000595362 272 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 HMGB1P50-201ENST00000605814 607 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 RMST_6.1-201ENST00000611980 203 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AC064801.1-201ENST00000612025 407 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AC107871.2-201ENST00000612894 502 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 MIR6731-201ENST00000614863 72 ntBASIC7.04□□□□□ -1.28
RTN4Q9NQC3 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RTN4Q9NQC3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms