Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC008568.2-201ENST00000623862 2313 ntBASIC2.3□□□□□ -2.04
EXOSC4Q9NPD3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
EXOSC4Q9NPD3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC012321.1-201ENST00000561622 1588 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 RNU5E-10P-201ENST00000363506 118 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AL356131.1-201ENST00000405826 414 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 RNA5SP80-201ENST00000410475 111 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 MTATP6P27-201ENST00000416987 621 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 RPL27AP8-201ENST00000424277 446 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC087499.2-201ENST00000432861 149 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC129850.1-201ENST00000436203 508 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 CR769767.1-201ENST00000436337 346 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC011816.1-201ENST00000441346 546 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC009296.1-201ENST00000443146 155 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 snoU13.28-201ENST00000459235 104 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC133134.1-201ENST00000466800 359 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC104164.3-201ENST00000467363 1258 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 RPL23AP70-201ENST00000483361 460 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 RPS27P26-201ENST00000494583 239 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 XKRY-201ENST00000510392 1100 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 CDC42P4-201ENST00000510507 563 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 RNU6-583P-201ENST00000516012 92 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 SNORA70.24-201ENST00000517233 118 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC022861.1-201ENST00000522981 663 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC005832.3-201ENST00000537929 631 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC007954.1-201ENST00000554198 494 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 HMGB1P6-201ENST00000569046 646 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 TMF1P1-201ENST00000576058 373 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 MIR3908-201ENST00000579798 126 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC004853.1-201ENST00000604902 698 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 AL121895.2-201ENST00000619558 447 ntBASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
EXOSC4Q9NPD3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 SNORA18.3-201ENST00000384122 132 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 RNU6-1122P-201ENST00000384449 107 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AL138827.1-201ENST00000402666 306 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AL590084.1-201ENST00000407885 387 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AL139421.1-201ENST00000423010 169 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 MTND2P20-201ENST00000440805 661 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 MTCO3P11-201ENST00000455103 774 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AL109741.2-201ENST00000455561 343 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AC026427.2-201ENST00000506228 536 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 RNU6-928P-201ENST00000516876 104 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AC021451.1-201ENST00000523498 1129 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AMZ2P1-203ENST00000565833 850 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AC105224.1-201ENST00000587055 421 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 VN1R78P-201ENST00000597393 564 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 RPL12P50-201ENST00000603116 116 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 MTND3P19-201ENST00000603825 345 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 DUXAP11-201ENST00000603858 526 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AL390208.1-201ENST00000605885 644 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 AL161629.2-201ENST00000615347 275 ntBASIC2.28□□□□□ -2.04
EXOSC4Q9NPD3 OR1S1-201ENST00000624470 978 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms