Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RPS15AP17-201ENST00000470598 390 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 RPL31P41-201ENST00000477967 372 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 RPL23AP70-201ENST00000483361 460 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AC098799.2-201ENST00000509466 868 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AC125611.1-201ENST00000549563 229 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 HSPE1P3-201ENST00000559254 309 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AC083760.1-201ENST00000589621 670 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AC004853.1-201ENST00000604902 698 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AP002802.2-201ENST00000605877 235 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AC013412.1-201ENST00000610687 192 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 IGHVIII-44-202ENST00000636235 289 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 AL022578.1-201ENST00000439330 1433 ntBASIC2.85□□□□□ -1.95
TM9SF3Q9HD45 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 RNU4-82P-201ENST00000362443 140 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 RNU6-707P-201ENST00000364647 95 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 MIR181B1-201ENST00000385240 110 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AL031679.1-201ENST00000400616 525 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AL592148.1-201ENST00000413568 445 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 USP9YP21-201ENST00000420603 432 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC007742.1-201ENST00000425789 329 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC009414.1-201ENST00000427200 443 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 ELOCP26-201ENST00000436067 329 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AL714022.1-201ENST00000439897 151 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 SNORD109B-201ENST00000458961 67 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 SNORD109A-201ENST00000459128 67 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 RPL21P41-201ENST00000459863 264 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 RPL23AP11-201ENST00000475260 469 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC116337.2-201ENST00000477662 156 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC090453.1-201ENST00000495560 436 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC026414.1-201ENST00000504046 698 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 HSPA8P13-201ENST00000523715 472 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC124947.2-202ENST00000552735 133 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC138915.2-201ENST00000569776 97 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 MIR5708-201ENST00000579723 85 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 MIR4637-201ENST00000582405 84 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 MIR3124-201ENST00000582636 67 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AL450472.3-201ENST00000615578 367 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC090132.2-201ENST00000615881 347 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AC084824.4-201ENST00000620106 731 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 MKKS-204ENST00000639674 192 ntBASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.84□□□□□ -1.95
TM9SF3Q9HD45 AL355596.1-201ENST00000565399 3996 ntBASIC2.84□□□□□ -1.96
TM9SF3Q9HD45 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.84□□□□□ -1.96
TM9SF3Q9HD45 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
TM9SF3Q9HD45 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
TM9SF3Q9HD45 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TM9SF3Q9HD45 SDAD1P2-201ENST00000441308 2028 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 CR848007.1-201ENST00000442354 1699 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 RNU6-270P-201ENST00000364131 105 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 MIR325-201ENST00000385260 98 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 Y_RNA.578-201ENST00000390903 88 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AL360182.1-201ENST00000397433 468 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 RN7SKP284-201ENST00000411002 343 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 RPS7P9-201ENST00000414704 586 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 Z85995.1-201ENST00000415547 335 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 OR4K11P-201ENST00000431829 904 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 PTGES3P1-201ENST00000439531 483 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC093155.1-201ENST00000440164 826 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC103975.1-201ENST00000482506 483 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC034159.1-201ENST00000513885 583 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC022861.1-201ENST00000522981 663 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC010546.1-201ENST00000569391 485 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC023043.3-201ENST00000593113 385 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AL606834.3-201ENST00000602615 496 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC093673.2-201ENST00000609674 331 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC005332.6-201ENST00000613178 446 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AL158163.2-201ENST00000619110 700 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 MIR6130-201ENST00000619419 109 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 AC004808.1-201ENST00000627671 721 ntBASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.83□□□□□ -1.96
TM9SF3Q9HD45 MIR4275-201ENST00000636486 87 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms