Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AC138915.3-201ENST00000562908 1389 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 SNORA20.2-201ENST00000383922 131 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 Y_RNA.402-201ENST00000383972 102 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 RPL21P109-201ENST00000422213 475 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 TPT1P14-201ENST00000448018 505 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 Y_RNA.693-201ENST00000516641 110 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AC090572.1-201ENST00000519251 160 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 SUMO2P20-201ENST00000520803 283 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AP000907.4-201ENST00000604143 237 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 BRDTP1-201ENST00000605735 677 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 SNORA51-201ENST00000606420 132 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AC245517.5-201ENST00000611529 162 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 AC079684.1-201ENST00000621405 437 ntBASIC3.95□□□□□ -1.78
USP29Q9HBJ7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP29Q9HBJ7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 Y_RNA.303-201ENST00000364998 94 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 RNU1-39P-201ENST00000383897 165 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 RNU6-837P-201ENST00000391056 108 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AL445584.1-201ENST00000431451 330 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 USP9YP7-201ENST00000436723 430 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 SNORA71B-202ENST00000439232 272 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 USP9YP32-201ENST00000452432 430 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 NANOGP10-201ENST00000453325 895 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 RPL21P11-201ENST00000461458 483 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AC023194.1-201ENST00000493084 308 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 PRDX4P1-201ENST00000507189 574 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AC105914.1-201ENST00000511798 226 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 Vault.1-201ENST00000516474 102 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 OR4T1P-201ENST00000554933 911 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 SUB1P2-201ENST00000556401 297 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AC011451.2-201ENST00000604303 598 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AC007363.1-201ENST00000604736 620 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AL137849.1-201ENST00000604767 169 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AL136363.1-201ENST00000605349 337 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AP001330.5-201ENST00000607176 411 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AC004067.1-201ENST00000608733 700 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 MIR1321-201ENST00000637766 79 ntBASIC3.94□□□□□ -1.78
USP29Q9HBJ7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
USP29Q9HBJ7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 RNU5A-8P-201ENST00000364102 114 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 RNU6-483P-201ENST00000384088 108 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 Y_RNA.453-201ENST00000384223 109 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 RPL30P2-201ENST00000414021 291 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 RPS15AP12-201ENST00000419498 388 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 ELOCP14-201ENST00000428070 331 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC119618.1-201ENST00000434191 222 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 HMGB1P31-201ENST00000437242 427 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 ELOCP7-201ENST00000439968 331 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AL662791.1-201ENST00000441992 928 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 NOTCH2P1-201ENST00000443481 624 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms