Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC008521.1-201ENST00000587471 187 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 NUTF2P8-201ENST00000604593 363 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AC011890.2-201ENST00000613393 294 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 FAM157A-202ENST00000615155 405 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 PISRT1.1-201ENST00000616930 107 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AC098657.3-201ENST00000620434 263 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AC092435.4-201ENST00000623012 4159 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 SMG1P6-201ENST00000532337 2930 ntBASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEC61A2Q9H9S3 AP000756.2-201ENST00000624168 2567 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-562P-201ENST00000362731 107 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-238P-201ENST00000363313 106 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 Y_RNA.176-201ENST00000363815 109 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 Y_RNA.188-201ENST00000363952 111 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 Y_RNA.463-201ENST00000384271 102 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 RNY1P14-201ENST00000384426 108 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AL360182.1-201ENST00000397433 468 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AL391417.1-201ENST00000404100 426 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 RNU2-50P-201ENST00000410494 143 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 Y_RNA.618-201ENST00000410949 107 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-603P-201ENST00000411403 107 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AC009237.10-201ENST00000414112 510 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 UBE2FP1-201ENST00000416536 447 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AL590632.1-201ENST00000424289 371 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AL772161.1-201ENST00000439130 476 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 RPS26P2-201ENST00000440331 348 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 FABP5P13-201ENST00000452144 328 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 RPS5P7-201ENST00000456664 608 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 DYNLL1P5-201ENST00000467158 270 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AC091868.1-201ENST00000508746 304 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AC005798.1-201ENST00000513715 387 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 RNU6-1016P-201ENST00000516689 94 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 RANP3-201ENST00000530970 276 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 MTCO3P23-201ENST00000561363 289 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AL158032.1-201ENST00000605401 106 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AC009229.3-201ENST00000608056 282 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 ATP5A1P2-202ENST00000616464 443 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 MIR7703-201ENST00000620784 77 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 AL445363.3-201ENST00000623080 671 ntBASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SEC61A2Q9H9S3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 RN7SKP115-201ENST00000363177 317 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 RNU1-83P-201ENST00000363426 164 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 SET-203ENST00000372688 801 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 Y_RNA.404-201ENST00000383978 102 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 SNORD70.1-201ENST00000391007 85 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 CYB5AP4-201ENST00000396692 399 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 NDUFS5P1-201ENST00000405668 289 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 RN7SKP100-201ENST00000411258 284 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AC009310.1-201ENST00000414414 451 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 RPL23AP38-201ENST00000423801 469 ntBASIC4.18□□□□□ -1.74
SEC61A2Q9H9S3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms