Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 RNU6-1282P-201ENST00000516735 96 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AL451007.1-201ENST00000595491 289 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AL391834.2-201ENST00000609982 546 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AC022306.3-201ENST00000619930 550 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 AL049641.1-201ENST00000441055 1948 ntBASIC2.87□□□□□ -1.95
POLR1EQ9GZS1 RNU6-97P-201ENST00000363387 104 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 RNU6-270P-201ENST00000364131 105 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 FO393413.1-201ENST00000402892 195 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 RNA5SP80-201ENST00000410475 111 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 RNU6-193P-201ENST00000410977 107 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AC096664.2-201ENST00000411843 406 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 Z85995.1-201ENST00000415547 335 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 TIMM9P2-201ENST00000419324 266 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 RPL7P37-201ENST00000425095 738 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AL513043.1-201ENST00000439124 535 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 OR10R1P-201ENST00000441524 1141 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AC112653.1-201ENST00000443851 386 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 EXOSC3P1-201ENST00000448649 500 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AC092155.2-201ENST00000454675 477 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 snoU109.3-201ENST00000459477 145 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 RPS27P26-201ENST00000494583 239 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AP002748.2-201ENST00000528671 348 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 HSPE1P20-201ENST00000538133 289 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 OR6C7P-201ENST00000547875 934 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AL512347.1-201ENST00000566420 503 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AC068135.2-201ENST00000569293 1028 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AC019159.1-201ENST00000605094 187 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 RPL23AP88-201ENST00000605759 454 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AL355493.4-201ENST00000618530 292 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AC010608.3-201ENST00000625048 527 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AC092593.1-201ENST00000515413 1815 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 ZNF519P1-201ENST00000449011 1626 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 AC026241.1-201ENST00000517873 2142 ntBASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR1EQ9GZS1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AL672167.1-206ENST00000356293 943 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 MIR26A1-201ENST00000362205 77 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 RNU6-1078P-201ENST00000364522 103 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 SNORA36C-201ENST00000384289 132 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 MIR181A2-201ENST00000384863 110 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 VN1R51P-201ENST00000411675 945 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 MTCO2P25-201ENST00000447065 681 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 RPL23AP20-201ENST00000447965 421 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC118282.1-201ENST00000506408 765 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC006499.2-201ENST00000513470 337 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 RNY4P37-201ENST00000516225 96 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 RNU6-714P-201ENST00000516963 103 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC128657.1-201ENST00000549459 145 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 MTND3P19-201ENST00000603825 345 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AL160237.3-201ENST00000604114 1013 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC135507.2-201ENST00000612443 309 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 UCA1.1-201ENST00000620952 75 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AL445264.1-201ENST00000621719 171 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 AC007785.2-201ENST00000598627 1916 ntBASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
POLR1EQ9GZS1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 AL161781.1-201ENST00000354277 403 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 RNU6-952P-201ENST00000391164 108 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 RNU4-22P-201ENST00000411058 166 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 RNA5SP492-201ENST00000411330 114 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 AC099548.1-201ENST00000421443 426 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 HSFY7P-201ENST00000432672 318 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 HSFY8P-201ENST00000437934 318 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 RPS29P6-201ENST00000438196 145 ntBASIC2.84□□□□□ -1.95
POLR1EQ9GZS1 AL135938.1-201ENST00000443141 297 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms