Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MIR6891-201ENST00000618788 93 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.17□□□□□ -1.74
NDC1Q9BTX1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.17□□□□□ -1.74
NDC1Q9BTX1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 AL139276.1-201ENST00000311910 1001 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 RNU1-108P-201ENST00000362556 161 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 RNU6-1249P-201ENST00000363237 111 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 Y_RNA.126-201ENST00000363382 111 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 RNA5SP175-201ENST00000364275 119 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 RNU2-36P-201ENST00000410361 191 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 RNU2-29P-201ENST00000410423 189 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 RPL23AP26-201ENST00000412728 464 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 RPS7P15-201ENST00000415804 584 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 AL161631.1-201ENST00000417933 486 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 EIF4EP1-201ENST00000422311 642 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 MTND2P23-201ENST00000422990 651 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 RPL7L1P1-201ENST00000448259 785 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 NUTF2P3-201ENST00000448540 384 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 SNORD19B-201ENST00000459623 84 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 UQCRHP4-201ENST00000471686 272 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 AC091885.1-201ENST00000506658 268 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 FAM206BP-201ENST00000510179 541 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 AC090151.1-201ENST00000520784 730 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 AC100770.1-201ENST00000532310 322 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 NCAPGP2-201ENST00000557911 754 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 MIR4293-201ENST00000584305 78 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 MIR3138-201ENST00000585238 82 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 MIR4424-201ENST00000585257 86 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 AP001836.1-201ENST00000604675 523 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 AL360085.1-201ENST00000604713 532 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 TAB3P1-202ENST00000452645 1634 ntBASIC4.16□□□□□ -1.74
NDC1Q9BTX1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NDC1Q9BTX1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.15□□□□□ -1.74
NDC1Q9BTX1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NDC1Q9BTX1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NDC1Q9BTX1 DDX10P1-201ENST00000448545 1933 ntBASIC4.15□□□□□ -1.74
NDC1Q9BTX1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NDC1Q9BTX1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NDC1Q9BTX1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
NDC1Q9BTX1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
NDC1Q9BTX1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
NDC1Q9BTX1 RNU6-522P-201ENST00000364497 107 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 RNA5SP366-201ENST00000365454 123 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 RNU5E-6P-201ENST00000365574 115 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 UBE2FP1-201ENST00000416536 447 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AP000942.1-201ENST00000463969 747 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 RPL7AP28-201ENST00000464513 571 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 RPS26P28-201ENST00000470806 348 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC026402.1-201ENST00000513642 170 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC026801.2-201ENST00000515352 425 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 RNA5SP446-201ENST00000515955 82 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 RNU6-1095P-201ENST00000516148 108 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 RNU6-327P-201ENST00000516270 127 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 SNORA31.9-201ENST00000516429 84 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 RNA5SP503-201ENST00000517047 117 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC020661.2-201ENST00000560114 134 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC093249.1-201ENST00000567049 203 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 MIR4703-201ENST00000577728 79 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC012669.1-201ENST00000603209 283 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AC103710.3-201ENST00000608157 948 ntBASIC4.15□□□□□ -1.75
NDC1Q9BTX1 AL133215.3-201ENST00000609801 448 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms