Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RPL31P41-201ENST00000477967 372 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 RPL23AP70-201ENST00000483361 460 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 RPS15AP34-201ENST00000487776 387 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 AC135721.1-201ENST00000497954 479 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 CDC42P4-201ENST00000510507 563 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 RNU6-1282P-201ENST00000516735 96 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 RNU6-1261P-201ENST00000517194 104 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 RN7SKP40-201ENST00000517211 242 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 AC122134.1-202ENST00000569111 1201 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 VN1R90P-201ENST00000595717 726 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 AL022067.1-201ENST00000602426 454 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 AC080013.4-201ENST00000607624 649 ntBASIC1.85□□□□□ -2.11
UPK3BQ9BT76 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UPK3BQ9BT76 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 Z99496.1-201ENST00000469424 1477 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 RNU1-112P-201ENST00000364401 164 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 SNORA67.1-201ENST00000364749 141 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 RNU1-100P-201ENST00000365255 165 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 RNU6-76P-201ENST00000384060 104 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 MIR34A-201ENST00000385130 110 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 MIR767-201ENST00000390228 109 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 UBE2V1P2-201ENST00000397758 440 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL512633.1-201ENST00000399931 655 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 RPS4XP8-201ENST00000402039 771 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 NDUFB4P7-201ENST00000423198 363 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 DPRXP1-201ENST00000426312 460 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC092427.1-202ENST00000430569 476 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL512844.2-201ENST00000433990 593 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC092427.1-201ENST00000439177 601 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL096829.2-201ENST00000446582 742 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AP000936.2-201ENST00000447151 681 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 MTND2P24-201ENST00000453434 806 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC026410.2-201ENST00000460281 156 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 HSPE1P6-201ENST00000479457 291 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC090453.1-201ENST00000495560 436 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 RPS27P27-201ENST00000498779 255 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 IGLV3-17-201ENST00000519099 244 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AP003066.2-201ENST00000529375 555 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 OR4R1P-201ENST00000529879 463 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC010546.1-201ENST00000569391 485 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC138915.2-201ENST00000569776 97 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC005498.1-201ENST00000592125 465 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC004853.1-201ENST00000604902 698 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL583856.2-201ENST00000606298 543 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL021368.1-201ENST00000607490 540 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL450472.3-201ENST00000615578 367 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AC090132.2-201ENST00000615881 347 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL157770.1-201ENST00000623049 439 ntBASIC1.84□□□□□ -2.11
UPK3BQ9BT76 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
UPK3BQ9BT76 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
UPK3BQ9BT76 AC135776.4-201ENST00000624300 1904 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 MIR196B-201ENST00000384852 84 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 MIR325-201ENST00000385260 98 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 MCTS2P-201ENST00000394552 546 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 LUZP4P1-201ENST00000415420 344 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 Z82209.1-201ENST00000422141 2135 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC018630.2-202ENST00000422992 927 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AL358075.3-201ENST00000426289 226 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 ARL5AP4-201ENST00000430731 512 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC112220.1-201ENST00000434628 355 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC093155.1-201ENST00000440164 826 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.83□□□□□ -2.12
UPK3BQ9BT76 RPS15AP27-201ENST00000449183 343 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC092155.2-201ENST00000454675 477 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC087588.1-201ENST00000462203 316 ntBASIC1.83□□□□□ -2.12
UPK3BQ9BT76 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms