Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AL353748.2-201ENST00000622148 471 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AL512506.2-201ENST00000624472 458 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AP000676.4-201ENST00000624659 623 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 MIR1291-201ENST00000627649 87 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.52□□□□□ -2.01
CDX2Q99626 MFSD8-245ENST00000641743 948 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 MTND5P19-201ENST00000424872 1794 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDX2Q99626 AC244517.1-201ENST00000606030 2086 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 NUP58P1-201ENST00000502546 1738 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 SNORA26.7-201ENST00000391288 122 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 RPS7P9-201ENST00000414704 586 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX2Q99626 AC013262.1-201ENST00000426710 252 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX2Q99626 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AL591719.1-201ENST00000444669 744 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 MTND2P39-201ENST00000457230 764 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.51□□□□□ -2.01
CDX2Q99626 MTND3P3-201ENST00000505004 126 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CDX2Q99626 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.51□□□□□ -2.01
CDX2Q99626 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX2Q99626 AC023632.1-201ENST00000518463 375 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.51□□□□□ -2.01
CDX2Q99626 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.51□□□□□ -2.01
CDX2Q99626 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.51□□□□□ -2.01
CDX2Q99626 AC135628.1-201ENST00000568867 534 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AC090079.2-201ENST00000575289 768 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AC090330.1-201ENST00000588646 764 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX2Q99626 DPRXP5-201ENST00000604662 539 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AC099785.1-201ENST00000605697 437 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AC008962.1-201ENST00000605729 304 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AC091946.2-201ENST00000606105 291 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.51□□□□□ -2.01
CDX2Q99626 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.51□□□□□ -2.01
CDX2Q99626 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 AP000720.1-201ENST00000625091 483 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 MIR219B-201ENST00000637023 88 ntBASIC2.51□□□□□ -2.01
CDX2Q99626 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CDX2Q99626 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CDX2Q99626 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.51□□□□□ -2.01
CDX2Q99626 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
CDX2Q99626 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX2Q99626 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CDX2Q99626 RNU6-1249P-201ENST00000363237 111 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 RNU6-707P-201ENST00000364647 95 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX2Q99626 CD24P4-201ENST00000382840 243 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 RNU6-1257P-201ENST00000384625 110 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 RPL21P75-201ENST00000396599 483 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 RPL21P28-201ENST00000401418 483 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AL592114.1-201ENST00000403842 483 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX2Q99626 USP9YP21-201ENST00000420603 432 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 RPS6P14-201ENST00000425165 719 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC093151.1-201ENST00000427711 313 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 MTATP6P4-201ENST00000427725 675 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX2Q99626 SNRPEP4-201ENST00000435815 279 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX2Q99626 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX2Q99626 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX2Q99626 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX2Q99626 RPL23AP58-201ENST00000440453 469 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 COX6CP2-201ENST00000444980 225 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 RPL21P39-201ENST00000463605 483 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC011979.1-201ENST00000472300 483 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC010301.1-201ENST00000473936 355 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 RPL21P93-201ENST00000480465 489 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC233702.1-201ENST00000482905 502 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC087190.1-201ENST00000484462 480 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC093591.1-201ENST00000491435 481 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 RPL21P16-201ENST00000495531 483 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC096751.1-202ENST00000502691 1067 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 KLRA1P-201ENST00000503499 986 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX2Q99626 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX2Q99626 SNORA48.10-201ENST00000516965 160 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 snoZ278.1-201ENST00000517059 112 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX2Q99626 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX2Q99626 SETP2-201ENST00000553886 926 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC055876.1-202ENST00000567053 138 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC090666.1-201ENST00000578241 445 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX2Q99626 GAS5-AS1-201ENST00000602767 694 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 DUXAP4-201ENST00000603046 613 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC128687.1-201ENST00000605304 619 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AP002802.2-201ENST00000605877 235 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC006329.2-201ENST00000611491 394 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDX2Q99626 AL157770.1-201ENST00000623049 439 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 AC080188.3-201ENST00000624842 748 ntBASIC2.5□□□□□ -2.01
CDX2Q99626 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX2Q99626 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms