Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 MTND2P33-201ENST00000506452 1031 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC114797.1-201ENST00000514003 728 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 Vault.3-201ENST00000516676 95 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 IGKV2D-19-201ENST00000523346 262 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 OR4H12P-201ENST00000556269 907 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC009063.1-201ENST00000563342 702 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC105224.1-201ENST00000587055 421 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AF038458.1-201ENST00000588406 262 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AL606834.2-201ENST00000602954 668 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC245014.2-201ENST00000603689 287 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC246785.4-201ENST00000605374 287 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC090425.2-201ENST00000608818 501 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC005332.10-201ENST00000612725 619 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC004696.1-201ENST00000614345 607 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AC015540.1-201ENST00000615828 501 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AL732618.1-201ENST00000623251 301 ntBASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.84□□□□□ -1.79
TRAPPC9Q96Q05 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.84□□□□□ -1.8
TRAPPC9Q96Q05 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRAPPC9Q96Q05 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRAPPC9Q96Q05 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRAPPC9Q96Q05 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
TRAPPC9Q96Q05 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TRAPPC9Q96Q05 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.84□□□□□ -1.8
TRAPPC9Q96Q05 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 OTUD4P1-201ENST00000237841 3067 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 RNU5A-6P-201ENST00000384136 116 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 SNORA36C-201ENST00000384289 132 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC110754.1-201ENST00000399740 601 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 TXNP7-201ENST00000406296 293 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 RNA5SP129-201ENST00000410276 118 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 PIGFP2-201ENST00000421400 651 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AL136380.1-201ENST00000447970 162 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 RBM43P1-201ENST00000476891 1081 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 RNA5SP468-201ENST00000516782 93 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 RNA5SP179-201ENST00000517284 121 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC022880.1-201ENST00000534017 973 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC022968.1-201ENST00000567372 442 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AP000860.1-201ENST00000605250 559 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC103710.2-201ENST00000609912 942 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC048347.1-201ENST00000624621 427 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC084035.1-201ENST00000634543 607 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 GABPAP-201ENST00000419271 1356 ntBASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRAPPC9Q96Q05 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AL133383.2-201ENST00000622958 2336 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 RNU6-50P-201ENST00000362356 103 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 RNU5A-1-201ENST00000362698 116 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 U3.11-201ENST00000364476 212 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 RNU6-213P-201ENST00000384051 104 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 HSPE1P8-201ENST00000406997 288 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 MTND3P17-201ENST00000416968 344 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC007283.2-201ENST00000424739 197 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 KCTD9P3-201ENST00000434597 1169 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AL358232.1-201ENST00000448030 501 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC006539.3-201ENST00000454258 129 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 MTCYBP1-201ENST00000454315 1119 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AL359385.1-201ENST00000456509 365 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC011825.1-201ENST00000484967 388 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AL358832.1-201ENST00000497800 389 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 RN7SKP83-201ENST00000516512 178 ntBASIC3.82□□□□□ -1.8
TRAPPC9Q96Q05 DUXAP2-201ENST00000519198 589 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms