Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL109741.2-201ENST00000455561 343 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AP000873.1-201ENST00000463987 400 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 MTND5P21-201ENST00000531961 522 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AL590099.1-201ENST00000615276 138 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 MIR6715B-201ENST00000637172 77 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 ZNF734P-201ENST00000419494 1534 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 RNU6-666P-201ENST00000363499 107 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 MCTS2P-201ENST00000394552 546 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AL357520.1-201ENST00000441557 453 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 NEFMP1-201ENST00000443423 1006 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AL078601.1-201ENST00000444542 271 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AL158032.1-201ENST00000605401 106 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AP003499.2-201ENST00000624100 483 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 RPL26P37-201ENST00000411983 438 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 RPL35AP22-201ENST00000436855 335 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 PSPHP1-201ENST00000450062 261 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AC006499.2-201ENST00000513470 337 ntBASIC1.17□□□□□ -2.22
CSMD1Q96PZ7 AC123912.3-201ENST00000600907 1367 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 RNA5SP489-201ENST00000410986 109 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AC005912.1-201ENST00000495392 255 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AC005034.5-201ENST00000604219 466 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AC116447.1-201ENST00000613153 453 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 HSPE1P11-201ENST00000339579 310 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 RNA5SP127-201ENST00000411051 133 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 RPS12P24-201ENST00000412619 387 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 RWDD4P2-201ENST00000426392 563 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 BMI1P1-201ENST00000445879 941 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 RWDD4P1-201ENST00000488019 565 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AC012493.3-201ENST00000604494 112 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AC011890.2-201ENST00000613393 294 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AP000676.4-201ENST00000624659 623 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 Y_RNA.136-201ENST00000363444 102 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 RNU6-461P-201ENST00000364195 107 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 Y_RNA.518-201ENST00000384552 113 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 RNA5SP354-201ENST00000391247 136 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 RN7SKP200-201ENST00000410564 320 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AP004242.1-201ENST00000533701 349 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 MIR3618-201ENST00000580330 88 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 AC090525.3-201ENST00000605601 189 ntBASIC1.16□□□□□ -2.22
CSMD1Q96PZ7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
CSMD1Q96PZ7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 AL358176.2-201ENST00000425769 204 ntBASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 RPL30P6-201ENST00000475925 342 ntBASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 AC022447.3-201ENST00000506865 495 ntBASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 Z85995.1-201ENST00000415547 335 ntBASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 HSPE1P3-201ENST00000559254 309 ntBASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 MIR3935-201ENST00000583472 104 ntBASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 AC012531.5-201ENST00000611375 151 ntBASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 AC087588.2-201ENST00000617667 426 ntBASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CSMD1Q96PZ7 RNU6-716P-201ENST00000365621 103 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 RPL23AP62-201ENST00000463396 453 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 RNU6-113P-201ENST00000516653 101 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AC006329.2-201ENST00000611491 394 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 MIR2909-201ENST00000617113 69 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AP001005.3-201ENST00000622049 129 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 MIR365B-201ENST00000362317 111 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 SNORD121B-201ENST00000458838 81 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 OR4K8P-201ENST00000578842 1048 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AP001029.3-201ENST00000588063 596 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 RNA5SP330-201ENST00000517096 96 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms