Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL139247.1-201ENST00000422768 325 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 AC003685.2-201ENST00000422795 395 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX27Q96L92 TPT1P14-201ENST00000448018 505 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX27Q96L92 HMGB3P30-201ENST00000457863 606 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 AL133162.1-201ENST00000463228 453 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX27Q96L92 AC022695.1-201ENST00000522089 237 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.14□□□□□ -1.75
SNX27Q96L92 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.14□□□□□ -1.75
SNX27Q96L92 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX27Q96L92 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX27Q96L92 DUXAP4-201ENST00000603046 613 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 AL034351.1-201ENST00000605288 668 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX27Q96L92 AC072046.2-201ENST00000618366 268 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 AC009268.2-201ENST00000621925 457 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 AC091953.2-201ENST00000623979 160 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.14□□□□□ -1.75
SNX27Q96L92 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SNX27Q96L92 UBE3AP2-201ENST00000429033 2259 ntBASIC4.14□□□□□ -1.75
SNX27Q96L92 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNX27Q96L92 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX27Q96L92 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX27Q96L92 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
SNX27Q96L92 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SNX27Q96L92 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNX27Q96L92 Y_RNA.41-201ENST00000362646 102 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 SNORA38.1-201ENST00000364172 131 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SNX27Q96L92 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SNX27Q96L92 RNU6-259P-201ENST00000383999 107 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 MIR19A-201ENST00000384878 82 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 RNU6-516P-201ENST00000411381 104 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 MTND1P21-201ENST00000412991 285 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 AC099677.1-201ENST00000420575 175 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX27Q96L92 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX27Q96L92 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX27Q96L92 RPL21P13-201ENST00000488305 481 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 AC093278.1-201ENST00000494700 600 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 AC020893.1-201ENST00000502452 580 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.13□□□□□ -1.75
SNX27Q96L92 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX27Q96L92 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SNX27Q96L92 AC107934.1-201ENST00000522215 217 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX27Q96L92 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SNX27Q96L92 AC018630.1-201ENST00000541376 925 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 OR4T1P-201ENST00000554933 911 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX27Q96L92 AC087481.2-201ENST00000565492 330 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 MIR3146-201ENST00000580367 79 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 COX6CP3-201ENST00000580869 223 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 AL161729.4-201ENST00000604650 476 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 AC007038.2-201ENST00000608095 740 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 AC090970.3-201ENST00000612566 866 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 MIR8058-201ENST00000615737 89 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SNX27Q96L92 AC244258.1-201ENST00000637553 1071 ntBASIC4.13□□□□□ -1.75
SNX27Q96L92 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX27Q96L92 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX27Q96L92 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
SNX27Q96L92 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX27Q96L92 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX27Q96L92 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX27Q96L92 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SNX27Q96L92 IPO8P1-201ENST00000455509 3109 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNX27Q96L92 RNY4P16-201ENST00000364768 94 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.12□□□□□ -1.75
SNX27Q96L92 SNORA54-201ENST00000384281 123 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 RNU6-1215P-201ENST00000384441 102 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SNX27Q96L92 Y_RNA.599-201ENST00000410489 109 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 RNU2-8P-201ENST00000410727 190 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX27Q96L92 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX27Q96L92 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX27Q96L92 ARPC3P1-201ENST00000437218 533 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX27Q96L92 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 RNU7-170P-201ENST00000459303 61 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 RPS3AP50-201ENST00000487064 803 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX27Q96L92 RPL37P25-201ENST00000507308 276 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 RAC1P2-201ENST00000511164 579 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 RNA5SP164-201ENST00000516533 110 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 RNU6-430P-201ENST00000517078 107 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.12□□□□□ -1.75
SNX27Q96L92 EIF1P4-201ENST00000572664 335 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 AC099489.2-201ENST00000574976 260 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 MIR4276-201ENST00000584832 70 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 NRBF2P1-201ENST00000587407 859 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 AP001429.1-201ENST00000602568 530 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 AC004492.1-201ENST00000607036 742 ntBASIC4.12□□□□□ -1.75
SNX27Q96L92 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX27Q96L92 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX27Q96L92 AC013476.2-201ENST00000614456 459 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms