Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC009318.2-201ENST00000610917 651 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USP47Q96K76 AL360181.4-201ENST00000621752 134 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 AL512506.2-201ENST00000624472 458 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 FAM35CP-201ENST00000554755 2470 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 NUP58P1-201ENST00000502546 1738 ntBASIC2.95□□□□□ -1.94
USP47Q96K76 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
USP47Q96K76 AC110774.1-201ENST00000623567 2018 ntBASIC2.94□□□□□ -1.94
USP47Q96K76 U3.29-201ENST00000391296 212 ntBASIC2.94□□□□□ -1.94
USP47Q96K76 RNA5SP247-201ENST00000411181 105 ntBASIC2.94□□□□□ -1.94
USP47Q96K76 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.94□□□□□ -1.94
USP47Q96K76 AC008628.1-201ENST00000508663 265 ntBASIC2.94□□□□□ -1.94
USP47Q96K76 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USP47Q96K76 RNU6-27P-201ENST00000516146 107 ntBASIC2.94□□□□□ -1.94
USP47Q96K76 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.94□□□□□ -1.94
USP47Q96K76 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.94□□□□□ -1.94
USP47Q96K76 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.94□□□□□ -1.94
USP47Q96K76 AC090666.1-201ENST00000578241 445 ntBASIC2.94□□□□□ -1.94
USP47Q96K76 AC091925.2-201ENST00000625059 256 ntBASIC2.94□□□□□ -1.94
USP47Q96K76 HSPA8P4-201ENST00000511877 1920 ntBASIC2.94□□□□□ -1.94
USP47Q96K76 SGO1P2-201ENST00000429458 1589 ntBASIC2.94□□□□□ -1.94
USP47Q96K76 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP47Q96K76 RNA5SP88-201ENST00000365560 109 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 RNU6-207P-201ENST00000384137 107 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 AC016769.3-201ENST00000396562 315 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.93□□□□□ -1.94
USP47Q96K76 AC092638.1-201ENST00000411966 1275 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 USP9YP19-201ENST00000412165 485 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 AL512637.2-201ENST00000431287 1256 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 SEPT14P24-201ENST00000447236 180 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.93□□□□□ -1.94
USP47Q96K76 RPL23AP70-201ENST00000483361 460 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.93□□□□□ -1.94
USP47Q96K76 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.93□□□□□ -1.94
USP47Q96K76 AC090502.2-201ENST00000549267 280 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 AC034268.2-201ENST00000571784 482 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 SNORD84-203ENST00000584275 78 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 AC090330.1-201ENST00000588646 764 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 AP003973.1-201ENST00000604639 691 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 AC055876.5-201ENST00000605667 259 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 AC008083.4-201ENST00000615076 444 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.93□□□□□ -1.94
USP47Q96K76 MIR219B-201ENST00000637023 88 ntBASIC2.93□□□□□ -1.94
USP47Q96K76 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
USP47Q96K76 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
USP47Q96K76 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP47Q96K76 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.93□□□□□ -1.94
USP47Q96K76 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP47Q96K76 MTND4P35-201ENST00000604257 1375 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
USP47Q96K76 RNU5B-1-201ENST00000363286 116 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 RNU6-839P-201ENST00000363347 108 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 MTCYBP15-201ENST00000433123 1127 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 MTND4LP10-201ENST00000435146 291 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 HSPE1P28-201ENST00000443139 211 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.92□□□□□ -1.94
USP47Q96K76 MTND2P19-201ENST00000449129 1012 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 AC015908.1-201ENST00000478739 476 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 AC006483.1-201ENST00000487308 313 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.92□□□□□ -1.94
USP47Q96K76 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.92□□□□□ -1.94
USP47Q96K76 AC006390.1-201ENST00000508068 283 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
USP47Q96K76 MTND4LP22-201ENST00000508209 276 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 AP003168.1-201ENST00000530091 307 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
USP47Q96K76 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.92□□□□□ -1.94
USP47Q96K76 CYB5AP5-201ENST00000549779 389 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 EEF1B2P4-201ENST00000551398 348 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.92□□□□□ -1.94
USP47Q96K76 SULT1C2P1-202ENST00000562418 459 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 FAM60BP-201ENST00000578364 658 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
USP47Q96K76 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.92□□□□□ -1.94
USP47Q96K76 AC245517.5-201ENST00000611529 162 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 AC131902.3-201ENST00000611767 581 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.92□□□□□ -1.94
USP47Q96K76 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
USP47Q96K76 ZNF663P-202ENST00000641770 1131 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
USP47Q96K76 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.92□□□□□ -1.94
USP47Q96K76 AC005336.3-201ENST00000623833 2679 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
USP47Q96K76 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
USP47Q96K76 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
USP47Q96K76 RNU1-101P-201ENST00000391171 127 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 MORF4L1P6-201ENST00000418771 268 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 AC099677.1-201ENST00000420575 175 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 RPL7P46-201ENST00000425129 740 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 MTCYBP32-201ENST00000427945 1084 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
USP47Q96K76 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.91□□□□□ -1.94
USP47Q96K76 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.91□□□□□ -1.94
USP47Q96K76 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.91□□□□□ -1.94
USP47Q96K76 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.91□□□□□ -1.94
USP47Q96K76 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.91□□□□□ -1.94
USP47Q96K76 AC022690.1-201ENST00000526681 550 ntBASIC2.91□□□□□ -1.94
USP47Q96K76 AC135628.1-201ENST00000568867 534 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms