Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 AC126365.2-201ENST00000580630 379 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 DUXAP11-201ENST00000603858 526 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AC069545.1-201ENST00000605671 358 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AL512427.1-201ENST00000618593 349 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 AC068880.5-201ENST00000624331 290 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 AP003485.1-201ENST00000625093 753 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
ECHDC3Q96DC8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ECHDC3Q96DC8 AC107982.1-201ENST00000507171 1300 ntBASIC2.57□□□□□ -2
ECHDC3Q96DC8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.57□□□□□ -2
ECHDC3Q96DC8 RNU6-1257P-201ENST00000384625 110 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 RNA5SP354-201ENST00000391247 136 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 ST13P20-201ENST00000447996 1065 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 RPL31P60-201ENST00000478450 367 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 AC023424.2-201ENST00000493479 777 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 RPL30P5-201ENST00000494923 336 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 RNA5SP320-201ENST00000516263 124 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 MIR3912-201ENST00000577566 105 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 AL136363.1-201ENST00000605349 337 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 TUG1_1.1-201ENST00000610654 145 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 AC090132.2-201ENST00000615881 347 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 AC084824.4-201ENST00000620106 731 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 AC079228.1-201ENST00000624774 1049 ntBASIC2.56□□□□□ -2
ECHDC3Q96DC8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
ECHDC3Q96DC8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.55□□□□□ -2
ECHDC3Q96DC8 RNU6-198P-201ENST00000384258 104 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 MIR518C-201ENST00000384822 101 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 MIR592-201ENST00000384959 97 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 MIR627-201ENST00000384979 97 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 AL031679.1-201ENST00000400616 525 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 DHFRP6-201ENST00000401776 268 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 HMGB1P17-201ENST00000403495 628 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 RPS3AP24-201ENST00000407896 734 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 AC080125.1-201ENST00000414888 684 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 RPL7L1P10-201ENST00000427790 463 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 USP9YP22-201ENST00000438971 294 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 AC009296.1-201ENST00000443146 155 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 AL121871.1-201ENST00000443413 436 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 HMGN1P5-201ENST00000448591 263 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 AC008571.1-201ENST00000467232 300 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 AC126389.1-201ENST00000477436 290 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.55□□□□□ -2
ECHDC3Q96DC8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 AL359273.1-201ENST00000510918 627 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 AC017037.2-201ENST00000513850 890 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 MTND5P4-201ENST00000514978 288 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 RNA5SP148-201ENST00000516527 94 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 RPPH1-2P-201ENST00000516688 293 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 RNU6-798P-201ENST00000516912 103 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 SNORA31.22-201ENST00000517204 135 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 UBTFL10-201ENST00000528532 562 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 AC234778.2-201ENST00000566241 354 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 MIR5092-201ENST00000583139 88 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 AC243829.7-201ENST00000633081 225 ntBASIC2.55□□□□□ -2
ECHDC3Q96DC8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ECHDC3Q96DC8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
ECHDC3Q96DC8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ECHDC3Q96DC8 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
ECHDC3Q96DC8 TPTE2P4-201ENST00000258589 1605 ntBASIC2.54□□□□□ -2
ECHDC3Q96DC8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.54□□□□□ -2
ECHDC3Q96DC8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.54□□□□□ -2
ECHDC3Q96DC8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.54□□□□□ -2
ECHDC3Q96DC8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ECHDC3Q96DC8 FRG1BP-201ENST00000278882 761 ntBASIC2.54□□□□□ -2
ECHDC3Q96DC8 Y_RNA.500-201ENST00000384466 111 ntBASIC2.54□□□□□ -2
ECHDC3Q96DC8 RNA5SP210-201ENST00000391034 120 ntBASIC2.54□□□□□ -2
ECHDC3Q96DC8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.54□□□□□ -2
ECHDC3Q96DC8 RNU2-25P-201ENST00000411041 191 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms