Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 EXOC5P1-201ENST00000510543 1969 ntBASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
CTHRC1Q96CG8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC087190.4-201ENST00000574616 8334 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AL365440.1-201ENST00000436135 2167 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 Y_RNA.157-201ENST00000363638 102 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 RNA5SP515-201ENST00000364570 118 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 RHOT1P2-201ENST00000366423 333 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 RNU6-1279P-201ENST00000383917 103 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 RNU1-13P-201ENST00000384499 162 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 MIR93-201ENST00000385024 80 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 MIR513A2-201ENST00000385249 127 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 SNORD37.1-201ENST00000390968 65 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 TXNP7-201ENST00000406296 293 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AL354719.1-201ENST00000406535 843 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 RNU6-1068P-201ENST00000410958 103 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AL356095.1-201ENST00000417217 199 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 SDCBPP3-201ENST00000419629 891 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 RAC1P6-201ENST00000423911 575 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 USP9YP8-201ENST00000441913 500 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 MTND1P18-201ENST00000448191 573 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 RN7SL432P-201ENST00000484057 298 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 MTCO1P35-201ENST00000515270 228 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC135001.1-201ENST00000544546 283 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC093012.1-202ENST00000549403 582 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC125611.2-201ENST00000551907 647 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 XIAPP1-201ENST00000603162 600 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 HMGN2P28-201ENST00000606102 262 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 Y_RNA.804-201ENST00000615262 101 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC104985.2-201ENST00000620598 500 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC006504.8-201ENST00000621046 635 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 RNA5SP196-201ENST00000625967 102 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 AC073544.1-201ENST00000600110 1595 ntBASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTHRC1Q96CG8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AL645937.1-201ENST00000641739 1652 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 BDP1P-201ENST00000582658 1990 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 Y_RNA.72-201ENST00000362894 103 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 Y_RNA.86-201ENST00000363020 111 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 RNU6-179P-201ENST00000363350 107 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 SNORA62.1-201ENST00000364287 154 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 SNORA23-201ENST00000365128 182 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AL136116.1-201ENST00000403591 381 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 HSPE1P12-201ENST00000412576 301 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC244098.2-201ENST00000422068 99 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 OR4C10P-201ENST00000434991 931 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC090774.1-201ENST00000435925 246 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 CACYBPP2-201ENST00000453625 678 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 PMCHL2-203ENST00000457791 237 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 MRPS17P3-201ENST00000465453 385 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 S100A11P1-201ENST00000477525 312 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 NIPA2P2-201ENST00000496376 1083 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC025445.1-201ENST00000502728 300 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 AC139783.2-201ENST00000504847 1145 ntBASIC3.78□□□□□ -1.8
CTHRC1Q96CG8 RNU6-507P-201ENST00000516045 100 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms