Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 Z77249.1-201ENST00000444622 1175 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 CBWD4P-201ENST00000445695 655 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 SEPT14P24-201ENST00000447236 180 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 RNA5SP281-201ENST00000516504 135 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AC023813.2-201ENST00000564321 469 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AC244517.12-201ENST00000623581 663 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AC068620.4-201ENST00000636730 1182 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 ZNF33CP-201ENST00000432492 2030 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 AL355578.1-201ENST00000607405 1328 ntBASIC2.21□□□□□ -2.06
SHROOM3Q8TF72 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 SNORA40.18-201ENST00000391200 128 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 PRRC2CP1-201ENST00000404428 159 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AL133384.1-201ENST00000412744 351 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AC010881.1-201ENST00000433830 235 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 TRIM60P18-201ENST00000441518 828 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AL050341.1-201ENST00000447743 313 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AL118520.1-201ENST00000450770 291 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AC233279.1-201ENST00000455300 423 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AC012181.1-201ENST00000479895 423 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AC025281.1-201ENST00000567026 265 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AC128687.1-201ENST00000605304 619 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 RPL23AP88-201ENST00000605759 454 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 RNU4-5P-201ENST00000607255 135 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AC027449.1-201ENST00000608890 407 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AC104985.3-201ENST00000623479 597 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 CU459211.1-201ENST00000635667 749 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AL049737.1-201ENST00000413920 1403 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 AL359893.1-201ENST00000447628 1580 ntBASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.2□□□□□ -2.06
SHROOM3Q8TF72 MIR378A-201ENST00000362177 66 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 RNU6-560P-201ENST00000364007 108 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 RNU6-707P-201ENST00000364647 95 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 RNA5SP167-201ENST00000365461 116 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 RNU6-444P-201ENST00000383988 108 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 RPL23AP39-201ENST00000415533 405 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 SFR1P2-201ENST00000421841 730 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 EEF1A1P39-201ENST00000440791 250 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL009048.1-201ENST00000450437 298 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 Z99714.1-201ENST00000450463 807 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 RPS15AP1-201ENST00000457423 391 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC011352.3-201ENST00000505162 593 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 MTATP6P9-201ENST00000515039 680 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC022790.1-201ENST00000522872 204 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AK6P1-201ENST00000540219 478 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 OR4T1P-201ENST00000554933 911 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 MTCO1P40-201ENST00000574371 625 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 MTND3P13-201ENST00000574391 343 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL450336.1-201ENST00000605180 586 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 RNA5SP88-201ENST00000365560 109 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC096533.1-201ENST00000411645 353 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC007435.1-201ENST00000421086 415 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC096632.1-201ENST00000427395 310 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC114973.1-201ENST00000429057 632 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 MTCO1P3-201ENST00000429327 192 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 Z80107.1-201ENST00000436830 412 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 RAB11AP1-201ENST00000442978 646 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC139103.1-201ENST00000534696 1030 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 MTCYBP27-201ENST00000555160 670 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms