Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RNU6-670P-201ENST00000364312 104 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 SNORD48-201ENST00000364953 64 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC091057.2-201ENST00000602594 792 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RPAP2P1-201ENST00000603626 1168 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 MTND5P35-201ENST00000557537 1720 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 SNORD56.5-201ENST00000364281 72 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RNU6-53P-201ENST00000365367 106 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 Y_RNA.354-201ENST00000365448 111 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 MIR524-201ENST00000385242 87 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AF274854.1-201ENST00000413236 615 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 HMGB1P27-201ENST00000431429 603 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 SNRPEP4-201ENST00000435815 279 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC093767.1-201ENST00000504523 156 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC093770.1-201ENST00000511559 571 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 HPVC1-201ENST00000629899 1198 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 MIR4496-201ENST00000635896 61 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RPS4XP3-201ENST00000398541 413 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC241520.1-201ENST00000422654 1099 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC003989.2-201ENST00000440224 169 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 RNU4-60P-201ENST00000517239 135 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 MIR4303-201ENST00000581299 66 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 AL355812.1-201ENST00000603215 216 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 MIR3199-2-201ENST00000636243 86 ntBASIC0.58□□□□□ -2.32
SYNE1Q8NF91 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SYNE1Q8NF91 DDX10P1-201ENST00000448545 1933 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AL136133.1-201ENST00000413694 376 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 SDR42E1P3-201ENST00000438345 502 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 Z99714.1-201ENST00000450463 807 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 NCOR1P1-202ENST00000486162 291 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 MLLT10P2-201ENST00000506434 249 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AL731537.2-201ENST00000561565 951 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 TPMTP3-201ENST00000411928 735 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 Z96811.1-201ENST00000445880 108 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC096751.1-202ENST00000502691 1067 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC115989.2-201ENST00000578640 563 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC020923.1-201ENST00000624021 917 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 RNU6-821P-201ENST00000390995 107 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 RPL17P12-201ENST00000413391 526 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AL136380.1-201ENST00000447970 162 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 ARPC3P2-201ENST00000457786 533 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC104472.2-201ENST00000469035 601 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC104435.1-201ENST00000483483 166 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 ZNF734P-201ENST00000419494 1534 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 SSXP1-201ENST00000453640 473 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC108734.3-201ENST00000481241 1165 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 MIR6767-201ENST00000637302 66 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC123912.3-201ENST00000600907 1367 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 MTND4P35-201ENST00000604257 1375 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 MIR625-201ENST00000385047 85 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 HSPE1P1-201ENST00000421494 318 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 NDUFA5P10-201ENST00000432147 357 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC244505.5-201ENST00000443639 207 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC023512.1-201ENST00000444513 499 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC016065.2-201ENST00000514530 444 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AC090751.1-201ENST00000566966 267 ntBASIC0.57□□□□□ -2.32
SYNE1Q8NF91 AL627230.5-201ENST00000619807 58 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms