Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AC011460.1-201ENST00000636268 1834 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 RNU6-76P-201ENST00000384060 104 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC025750.1-201ENST00000399891 379 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 MIR887-201ENST00000401258 79 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 BX323014.1-201ENST00000412876 237 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AL139281.1-201ENST00000422120 335 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 RPS27AP14-201ENST00000422868 454 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AL365184.2-201ENST00000431139 435 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC109583.1-201ENST00000432156 268 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 SNRPEP4-201ENST00000435815 279 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 HSPD1P21-201ENST00000436541 245 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 UBE2V1P13-201ENST00000436983 439 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 ATP5C1P1-201ENST00000441945 895 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 RPS12P18-201ENST00000442381 270 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AL121871.1-201ENST00000443413 436 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 COX6CP2-201ENST00000444980 225 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 RPL21P23-201ENST00000446654 460 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 TPT1P14-201ENST00000448018 505 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC026801.2-201ENST00000515352 425 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC087373.1-201ENST00000524920 491 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC022690.1-201ENST00000526681 550 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 OSBPL9P5-201ENST00000542581 171 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC136624.4-201ENST00000573044 370 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC105224.1-201ENST00000587055 421 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 VN1R85P-201ENST00000601587 426 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC004067.1-201ENST00000608733 700 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AL121772.2-201ENST00000614331 297 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC091965.5-201ENST00000624785 342 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 AC009093.8-201ENST00000641769 292 ntBASIC3.17□□□□□ -1.9
CCDC63Q8NA47 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC63Q8NA47 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC092125.1-201ENST00000562568 1995 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 PABPC1P9-201ENST00000426076 1612 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 RNU5F-6P-201ENST00000362979 116 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 RNU6-501P-201ENST00000364072 100 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 U8.9-201ENST00000365667 134 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 RNU6-637P-201ENST00000384050 107 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 SNORD116-8-201ENST00000384365 95 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 MIR181B1-201ENST00000385240 110 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 RNU6-1077P-201ENST00000410506 102 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC104332.2-201ENST00000429959 156 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 MTCO1P42-201ENST00000457379 726 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC106707.2-201ENST00000484182 374 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC109486.1-201ENST00000486833 374 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 RPF2P2-201ENST00000504693 896 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 RNU6-798P-201ENST00000516912 103 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 ERHP1-201ENST00000523006 310 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AL133271.1-201ENST00000538229 291 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 CCNG2P1-201ENST00000549521 1000 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 HIGD1AP1-201ENST00000550979 275 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 SETP2-201ENST00000553886 926 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 PCMTD1P2-201ENST00000565017 355 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 CLIC4P2-201ENST00000601934 717 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 PRELID3BP8-201ENST00000604148 295 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC008962.1-201ENST00000605729 304 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AL627309.6-201ENST00000606857 840 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 U3.45-201ENST00000607547 219 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC009570.1-201ENST00000609599 745 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AL603758.1-201ENST00000618654 241 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms