Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC128657.1-201ENST00000549459 145 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC002400.1-201ENST00000569310 726 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC105224.1-201ENST00000587055 421 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC093227.2-201ENST00000589357 285 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 BNIP3P23-201ENST00000599655 511 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC004067.1-201ENST00000608733 700 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC072039.2-201ENST00000608883 439 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AL360219.1-201ENST00000610230 366 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC019226.2-201ENST00000625973 424 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC084035.1-201ENST00000634543 607 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC090740.1-201ENST00000623193 2262 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 RNU5A-1-201ENST00000362698 116 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 Y_RNA.169-201ENST00000363745 96 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 RNU6-853P-201ENST00000364306 107 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 SNORA1.3-201ENST00000384676 136 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 MIR218-2-201ENST00000385006 110 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 HMGB1P11-201ENST00000413899 637 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 HSFY4P-201ENST00000415994 1181 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AL513477.1-202ENST00000417061 214 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 UBE2D3P1-201ENST00000436669 444 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 MTCYBP39-201ENST00000437562 491 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC106707.2-201ENST00000484182 374 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AIG1P1-201ENST00000503376 148 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC026801.2-201ENST00000515352 425 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 SNORA31.22-201ENST00000517204 135 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AP003497.1-201ENST00000528472 562 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AP005205.1-201ENST00000563503 508 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC097468.3-201ENST00000607956 456 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AL138880.2-201ENST00000616214 239 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC068831.8-201ENST00000620171 435 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC068724.3-201ENST00000625906 87 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 AC009093.8-201ENST00000641769 292 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 MTND4P16-201ENST00000466108 1367 ntBASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.57□□□□□ -2
CCDC71LQ8N9Z2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 RNU5E-8P-201ENST00000363502 116 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 RNU6-1078P-201ENST00000364522 103 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 RNU6-76P-201ENST00000384060 104 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 RNA5SP252-201ENST00000391131 119 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 RPL7P25-201ENST00000404151 721 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 SNORD88.1-201ENST00000408684 91 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 MTND4P20-201ENST00000424125 869 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 RPS6P15-201ENST00000431996 751 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 UBE2FP3-201ENST00000436366 524 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 NUTF2P7-201ENST00000453086 375 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC021382.1-201ENST00000483523 359 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 RPL21P13-201ENST00000488305 481 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AP001025.2-201ENST00000490908 477 ntBASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.56□□□□□ -2
CCDC71LQ8N9Z2 AC093809.1-201ENST00000509155 340 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms