Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC009812.4-201ENST00000569134 1805 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AC011460.1-201ENST00000636268 1834 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 RNA5SP252-201ENST00000391131 119 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 RNU2-52P-201ENST00000410680 190 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 ARL5AP4-201ENST00000430731 512 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AC004866.2-201ENST00000438285 481 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 MTCYBP34-201ENST00000439552 670 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 OFD1P3Y-201ENST00000453312 783 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AC023424.2-201ENST00000493479 777 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AC006499.2-201ENST00000513470 337 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 LRRC6P1-201ENST00000532188 885 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AC243972.3-201ENST00000539655 198 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 CR383656.7-201ENST00000548164 174 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 OR2AS2P-201ENST00000606902 342 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 AC104763.3-201ENST00000613765 618 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 LINC02211-204ENST00000642024 1070 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 OR4G11P-202ENST00000642116 1414 ntBASIC2.85□□□□□ -1.95
CCDC65Q8IXS2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 RNU6-343P-201ENST00000364709 104 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 RPS4XP3-201ENST00000398541 413 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 FAT1P1-201ENST00000406588 507 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 RNA5SP80-201ENST00000410475 111 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC092427.1-202ENST00000430569 476 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AL831737.1-201ENST00000441288 271 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 MTCO1P53-201ENST00000441633 699 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AL358794.1-201ENST00000445689 381 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AL359385.1-201ENST00000456509 365 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 SETP11-201ENST00000473027 690 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC114322.1-201ENST00000506771 926 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC093677.1-201ENST00000514414 678 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 SNORA70.16-201ENST00000516390 95 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 RNU1-104P-201ENST00000517280 175 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 OR4R1P-201ENST00000529879 463 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC005832.3-201ENST00000537929 631 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AL132657.2-201ENST00000564417 358 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 OR4K8P-201ENST00000578842 1048 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC012443.1-201ENST00000605605 231 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC092608.2-201ENST00000624427 218 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 AC013437.2-201ENST00000639587 677 ntBASIC2.84□□□□□ -1.95
CCDC65Q8IXS2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC65Q8IXS2 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AC097714.1-201ENST00000511272 1647 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 SNORA1.3-201ENST00000384676 136 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 MIR122-201ENST00000385044 85 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 MIR34A-201ENST00000385130 110 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AL139039.1-201ENST00000401900 692 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 HMGB1P17-201ENST00000403495 628 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AL356131.1-201ENST00000405826 414 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AC080125.1-201ENST00000414888 684 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AC019178.2-201ENST00000423595 505 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 RPL23AP76-201ENST00000441860 458 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 RAC1P7-201ENST00000445367 377 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AL589880.1-201ENST00000448271 287 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 RNA5SP356-201ENST00000515972 94 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 RNU6-583P-201ENST00000516012 92 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 CKS1BP7-201ENST00000522230 235 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 MIR4319-201ENST00000577285 85 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 VN1R78P-201ENST00000597393 564 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AC004853.1-201ENST00000604902 698 ntBASIC2.83□□□□□ -1.96
CCDC65Q8IXS2 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms