Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNU6-1159P-201ENST00000362933 107 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 RNU6-886P-201ENST00000384319 105 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 SNORA16A-201ENST00000384342 137 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.518-201ENST00000384552 113 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 PPIAP9-201ENST00000403866 498 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 U3.35-201ENST00000408405 208 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 RNU6-607P-201ENST00000411283 108 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 ELOCP20-201ENST00000422460 345 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 ACA59.1-201ENST00000515966 143 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 SNORA31.22-201ENST00000517204 135 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AL161713.1-201ENST00000555538 145 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AC006600.1-201ENST00000572529 153 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 MIR4311-201ENST00000580794 100 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 MIR4273-201ENST00000582824 84 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AC004792.1-201ENST00000614523 137 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.64-201ENST00000362845 102 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 RNY1P16-201ENST00000363063 111 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 RNU6-76P-201ENST00000384060 104 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 RNU6-398P-201ENST00000384143 109 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 RNU1-136P-201ENST00000384181 164 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.526-201ENST00000384572 110 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.534-201ENST00000384599 112 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.551-201ENST00000384661 102 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 RNU6-837P-201ENST00000391056 108 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 UBE2D3P2-201ENST00000424409 445 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 TMEM183AP1-205ENST00000432739 290 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AC009127.1-201ENST00000467090 155 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 RPS4XP20-201ENST00000505751 772 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 SNORA25.11-201ENST00000515935 105 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.703-201ENST00000516846 111 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 RNU6-255P-201ENST00000516957 105 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AC008694.2-201ENST00000517591 306 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 EDDM3DP-201ENST00000554692 434 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 ATP5J2P6-201ENST00000565203 266 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 HMGB2P1-201ENST00000591146 634 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AC011487.3-201ENST00000593607 453 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 BDH2P1-201ENST00000602288 736 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AC068790.4-201ENST00000602474 263 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AC087385.3-201ENST00000620477 187 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 SAMMSON-213ENST00000641336 1521 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 AC090971.4-201ENST00000560291 1800 ntBASIC5.67□□□□□ -1.5
RNF135Q8IUD6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF135Q8IUD6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 RNY3P11-201ENST00000364153 102 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 RNU6-806P-201ENST00000365147 105 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 RNU6-882P-201ENST00000391025 103 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 AP000275.1-201ENST00000411943 390 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 AC063979.1-201ENST00000415539 377 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 COX6B1P1-201ENST00000415962 213 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 AC092647.2-201ENST00000452998 253 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 RPL23AP2-201ENST00000471227 466 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 TOMM20P2-201ENST00000540082 421 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 AC068446.3-201ENST00000555285 382 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 AC005951.2-201ENST00000576282 495 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms