Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 CEP170P1-201ENST00000502249 4587 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 RNU4-1-201ENST00000363925 141 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 RNY1P12-201ENST00000364251 105 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 Y_RNA.256-201ENST00000364594 104 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 RNU6-282P-201ENST00000365357 103 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 Y_RNA.402-201ENST00000383972 102 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 Y_RNA.453-201ENST00000384223 109 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 SOD2P1-201ENST00000396543 562 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 Y_RNA.625-201ENST00000411256 107 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 RPS15AP12-201ENST00000419498 388 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 ELOCP23-201ENST00000452014 332 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 NANOGP10-201ENST00000453325 895 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC092989.1-201ENST00000481235 277 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 VN1R105P-201ENST00000486595 910 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 ARL4AP2-201ENST00000507378 601 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC105914.1-201ENST00000511798 226 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 CYCSP30-201ENST00000546447 172 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 BNIP3P33-201ENST00000598912 569 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC244505.7-201ENST00000599675 272 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 KC877982.1-201ENST00000602313 470 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC012507.3-201ENST00000603556 477 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 AC099654.14-201ENST00000638599 341 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX6Q8HWS3 USP8P1-201ENST00000494673 3183 ntBASIC3.86□□□□□ -1.79
RFX6Q8HWS3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 OR5J1P-201ENST00000313544 939 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 RNU6-1085P-201ENST00000363576 107 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 RNY4P14-201ENST00000363656 96 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 RNU6-263P-201ENST00000363811 107 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 HMGN1P24-201ENST00000412282 298 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 USP9YP6-201ENST00000413550 854 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 ELOCP4-201ENST00000420090 333 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AC137499.1-201ENST00000427602 88 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 ELOCP14-201ENST00000428070 331 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 FTH1P1-201ENST00000437933 532 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 ELOCP7-201ENST00000439968 331 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 RAC1P7-201ENST00000445367 377 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AC092001.1-201ENST00000453012 261 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AC079382.1-201ENST00000493346 557 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AC017037.2-201ENST00000513850 890 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AP003034.1-201ENST00000534621 422 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 SUB1P2-201ENST00000556401 297 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 MIR3167-201ENST00000579623 85 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.85□□□□□ -1.79
RFX6Q8HWS3 AC053481.4-201ENST00000583164 216 ntBASIC3.85□□□□□ -1.79
RFX6Q8HWS3 KLKP1-201ENST00000595979 403 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms