Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.88□□□□□ -2.27
VPS13BQ7Z7G8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS13BQ7Z7G8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC0.88□□□□□ -2.27
VPS13BQ7Z7G8 RNY1P4-201ENST00000384595 115 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 MCTS2P-201ENST00000394552 546 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 RPL17P49-201ENST00000443728 411 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AC005297.2-201ENST00000450430 606 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 SNORD121B-201ENST00000458838 81 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AC034222.1-201ENST00000494052 532 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 RNU6-113P-201ENST00000516653 101 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AC104115.2-201ENST00000523026 687 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AL137100.2-201ENST00000555786 315 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AL136164.4-201ENST00000625013 2135 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AC121333.1-201ENST00000567488 2709 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 SMARCE1P4-201ENST00000523647 241 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 GLYCAM1-201ENST00000546596 285 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 MIR98-201ENST00000606724 119 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AC008121.3-201ENST00000618726 433 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AL158801.5-201ENST00000623123 465 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AL161722.3-201ENST00000605789 2983 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 FAM106DP-201ENST00000586416 501 ntBASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS13BQ7Z7G8 RPS6P15-201ENST00000431996 751 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 NIFKP8-201ENST00000560500 874 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC011712.1-201ENST00000588959 234 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AL596028.1-201ENST00000326971 197 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 MTCYBP12-201ENST00000440559 1134 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC009474.2-201ENST00000451383 136 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC011979.1-201ENST00000472300 483 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC023825.1-201ENST00000566704 1030 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 RPL23AP78-201ENST00000599928 470 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC091057.2-201ENST00000602594 792 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 STMN1P1-201ENST00000617809 440 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AL033519.2-201ENST00000403958 392 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 RPL35AP22-201ENST00000436855 335 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC109471.1-201ENST00000511631 612 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 Y_RNA.675-201ENST00000516389 149 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC025755.1-201ENST00000521306 278 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 MIR1273G-201ENST00000577677 100 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 OR4K8P-201ENST00000578842 1048 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AP001029.3-201ENST00000588063 596 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC243773.3-201ENST00000613270 256 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 DUXAP9-208ENST00000622815 614 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 RNA5SP489-201ENST00000410986 109 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC244033.1-201ENST00000426826 870 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 RNA5SP436-201ENST00000516020 115 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 DNAJC8P1-201ENST00000554535 372 ntBASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
VPS13BQ7Z7G8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 RPL23AP41-201ENST00000484754 458 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 MTCO1P47-201ENST00000523889 1271 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 ZNF209P-201ENST00000593450 2304 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 AC103710.2-202ENST00000641454 2853 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 CKS1BP5-201ENST00000434172 273 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 TPRKBP1-201ENST00000456243 481 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 AC092902.1-201ENST00000486999 259 ntBASIC0.85□□□□□ -2.27
VPS13BQ7Z7G8 SNORA31.24-201ENST00000517232 57 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms