Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 Y_RNA.159-201ENST00000363674 87 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 Y_RNA.409-201ENST00000383990 98 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 USP9YP27-201ENST00000418455 438 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 OR51AB1P-201ENST00000429046 620 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 RPL23AP20-201ENST00000447965 421 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 RBMY2UP-201ENST00000453474 324 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 RPS4XP10-201ENST00000465034 731 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 BTF3L4P4-201ENST00000506381 449 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AC074250.1-201ENST00000511117 192 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 Y_RNA.702-201ENST00000516843 96 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AC107934.1-201ENST00000522215 217 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AP001646.1-201ENST00000527936 915 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 UBE2L4-201ENST00000587688 464 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AC012507.3-201ENST00000603556 477 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AC055876.5-201ENST00000605667 259 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AL391813.2-201ENST00000609113 322 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 AL158801.5-201ENST00000623123 465 ntBASIC4.47□□□□□ -1.69
UBE3BQ7Z3V4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
UBE3BQ7Z3V4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 RNA5SP502-201ENST00000362694 119 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 Y_RNA.295-201ENST00000364918 102 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-761P-201ENST00000384148 107 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 Y_RNA.481-201ENST00000384373 102 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 RNVU1-14-201ENST00000384770 164 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 MIR34B-201ENST00000385076 84 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 RPL23AP48-201ENST00000406913 488 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AL603766.1-201ENST00000407763 664 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AC127537.2-201ENST00000439258 465 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 RPL7P52-201ENST00000449200 742 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 MTCO2P29-201ENST00000465212 189 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AC087385.1-201ENST00000475062 312 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AC023194.1-201ENST00000493084 308 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 MTCYBP18-201ENST00000501056 747 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AC010587.1-201ENST00000505809 469 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 Y_RNA.704-201ENST00000516851 102 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AC024224.1-201ENST00000538284 609 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 SETP2-201ENST00000553886 926 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 MIR3167-201ENST00000579623 85 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AC007566.2-201ENST00000603642 413 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AC139792.3-201ENST00000623525 224 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AP003122.6-201ENST00000623831 495 ntBASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
UBE3BQ7Z3V4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AL356489.2-201ENST00000566968 3528 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 RNU4-35P-201ENST00000362588 141 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 RNU1-39P-201ENST00000383897 165 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-483P-201ENST00000384088 108 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AMD1P2-201ENST00000412936 992 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC004987.3-201ENST00000413879 771 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC017079.2-201ENST00000416102 485 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AL353193.1-201ENST00000421444 268 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 U3.44-201ENST00000458938 192 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC021382.1-201ENST00000483523 359 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 OR5H5P-201ENST00000503164 928 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms