Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC083798.1-201ENST00000472671 131 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC018710.1-201ENST00000506509 158 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC046134.1-201ENST00000514454 666 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RNU6-875P-201ENST00000516488 106 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AP004242.1-201ENST00000533701 349 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 SETP7-201ENST00000552169 453 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC006270.2-201ENST00000578523 652 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC008739.3-201ENST00000603262 127 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC103710.2-201ENST00000609912 942 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RMST_3.1-201ENST00000611651 109 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC004825.2-201ENST00000616634 455 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 RMST_9.1-201ENST00000619945 193 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AP003122.6-201ENST00000623831 495 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AC138649.5-201ENST00000637456 137 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 AL354685.2-201ENST00000448218 1447 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.24□□□□□ -1.89
C9orf139Q6ZV77 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RNA5SP189-201ENST00000364920 115 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RNU6-74P-201ENST00000384235 107 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RNU6-39P-201ENST00000384344 107 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 MIR449B-201ENST00000384995 97 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RNU6-837P-201ENST00000391056 108 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RNA5SP56-201ENST00000410277 118 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RNU2-41P-201ENST00000410991 178 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 SNORA57.3-201ENST00000411095 141 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RPL21P111-201ENST00000418453 477 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 FTH1P6-201ENST00000430768 320 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 ELOCP18-201ENST00000434209 337 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC093156.1-201ENST00000440382 670 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 MTND4P25-201ENST00000441039 533 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC016691.1-201ENST00000441321 413 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 NOTCH2P1-201ENST00000443481 624 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RPL7L1P8-201ENST00000469911 741 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC006517.1-201ENST00000480485 328 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC025465.4-201ENST00000513422 638 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RN7SKP116-201ENST00000516902 319 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RNU6-798P-201ENST00000516912 103 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 YPEL5P3-201ENST00000547227 352 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 CBX3P5-201ENST00000552017 521 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC012182.1-201ENST00000570133 895 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 RPL23AP87-202ENST00000573039 466 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 COX6CP3-201ENST00000580869 223 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC010928.3-201ENST00000587712 541 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC098848.2-201ENST00000588023 330 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC008945.2-201ENST00000606056 604 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC007038.2-201ENST00000608095 740 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC064801.1-201ENST00000612025 407 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 AC024614.3-201ENST00000637860 256 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 MTND4P12-201ENST00000498999 1377 ntBASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms