Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC017037.2-201ENST00000513850 890 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC093303.1-201ENST00000514549 295 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AL137161.1-201ENST00000532231 390 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AL355836.1-201ENST00000555951 870 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC092747.3-201ENST00000603769 301 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC010205.1-201ENST00000616668 449 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 MIR6891-201ENST00000618788 93 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 AC055839.1-201ENST00000634467 498 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 MAPK10-349ENST00000641767 3661 ntBASIC5.5□□□□□ -1.53
PRPF40BQ6NWY9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 BDP1P-201ENST00000582658 1990 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RNU6-188P-201ENST00000364207 107 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 Y_RNA.339-201ENST00000365325 102 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 ENSAP1-201ENST00000392855 326 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 SNORA11F-201ENST00000408237 128 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RN7SKP159-201ENST00000410657 292 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RPS12P5-201ENST00000423449 371 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 AC005019.1-201ENST00000436455 431 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RPL12P46-201ENST00000436610 195 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RNU7-152P-201ENST00000458982 64 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RPS27AP13-201ENST00000498403 237 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RN7SKP24-201ENST00000515888 284 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RNA5SP446-201ENST00000515955 82 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RNU6-1088P-201ENST00000516850 104 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 AC022790.1-201ENST00000522872 204 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 APOOP3-201ENST00000536787 586 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 AL352979.3-201ENST00000553515 247 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 XIAPP1-201ENST00000603162 600 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 AC244517.12-201ENST00000623581 663 ntBASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PRPF40BQ6NWY9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 RNU5E-6P-201ENST00000365574 115 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 RNA5SP151-201ENST00000365632 117 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 SNORA22B-201ENST00000383876 138 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 SNORD51-201ENST00000384320 80 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 SNORA24.1-201ENST00000384401 135 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 UBE2V1P2-201ENST00000397758 440 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 MIR921-201ENST00000401133 56 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 RN7SKP158-201ENST00000410453 326 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 RNU4-46P-201ENST00000410818 138 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 AC009237.10-201ENST00000414112 510 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 TRBVA-201ENST00000498804 316 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 AC104806.1-201ENST00000508720 308 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 RNU6-566P-201ENST00000516790 107 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 SNRPGP18-201ENST00000553000 214 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 AC079587.1-201ENST00000603846 277 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 AC106900.2-201ENST00000604994 317 ntBASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PRPF40BQ6NWY9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms